G1671546


Basic Information

Item Value
gene id G1671546
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18385454 ~ 18387516 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1912498
CACAGTTAGAACCCCTTTtccctgaacaaggtctaaaacacaTGTTTGATGTGCAAATCAAATGTTGTTGGTATCgtaagaaacactgtcaccaaaTTCAAGCAAAATTTCAACCATAAAATACAGTTATACAGCTACACTTTTCCCAGAACAAGGTCTCAATTGTGGACATGTTTAATGCAATTGCAAATTGGTTTCAGCGTAAAATACAGTTATAACCACTTCCCAgaacaaggtctaaaacacatgtttgatgcaattgcaaagaaaatgtccacAATTGAGATAGTAGGAACACCTTGGACCATTTTCAGTAGGTTTCAAGCATAAAATACTgttataaccacttttccctgTACAAGGTCTAAaacacatgtttgatgcaattgcaaagaaaatgtccacAATTGAGATAGTAGGAACACCTTGGACCATTTTCAGTAGGTTTCAAGCATAAAATACTgttataaccacttttccctgTACAAGGTCTAAAACACATGTTTGGTGCAATTAGCAAATAAAATGTTGTCCACGCGTTGTTGGGATGgtaagaaacactgtcaccaaaTTCAAGCAAAATTTCAACCATAAAATACAGTAATAACCACTTTTCCCTGTACAAGGTCTAAaacacatgtttgatgcaattgcaaagaaaatgtccacAATTGAGATAGTAGGAACACCTTGGACCATTTTCAGTAGGTTTCAAGCATAAAATACTgttataaccacttttccctgaacaaggtctaaaacacatgtttgatgcaattAGCAAATAAAATGTTGTCCACGCGTTGTTGGAATGgtaagaaacactgtcaccaaaTTCAAGCAAAATTTCAACCATAAAATACTGTttataaccacttttccctgaacaacgtctaaaacacatgtttgatgcaattAGCAAATAAAATGTTCACAATTGTGGTTATAACAGTATTTTATGCTTGAAACCTACTGAAAATTGTCCAAGgtgttcctactatctcaattgtggacattttctttgcaattgcatcaaacactttttagaccttgttctgggaaaagtggttataactgTATTTTATGCTTGAAACCTACTGAATATGGTCCAAGGTGTTCCTACTATCTCTCAATTgtggacattttctttgcaattgcatcaaacatgtgttttagaccttgttctgagaaaagtggttataactgtattttatgctgaaaattgtccaaggtgttcctactatctcaattgtggacattttctttgcaattgcatcaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1912498 True 1282 lncRNA 0.35 5 18385454 18387516

Neighbor

gene id symbol gene type direction distance location
LOC118942047 NA coding downstream 996 18383865 ~ 18384458 (-)
LOC110512504 NA coding downstream 3807 18373775 ~ 18381647 (-)
LOC110498760 stub1 coding downstream 932733 17442590 ~ 17452727 (-)
LOC110498759 NA coding downstream 954398 17428615 ~ 17434040 (-)
LOC110499078 LOC106578245 coding downstream 1011139 17367169 ~ 17374315 (-)
LOC110498770 LOC106589258 coding upstream 366578 18754094 ~ 18887492 (-)
LOC110499157 LOC106589261 coding upstream 502554 18890070 ~ 19003867 (-)
LOC110499154 LOC106589262 coding upstream 666610 19054126 ~ 19095333 (-)
LOC110499148 LOC106589265 coding upstream 875475 19262991 ~ 19277123 (-)
LOC110499147 LOC106589265 coding upstream 889755 19277271 ~ 19294949 (-)
G1671541 NA non-coding downstream 16281 18350871 ~ 18369173 (-)
G1671540 NA non-coding downstream 34620 18347331 ~ 18350834 (-)
G1671538 NA non-coding downstream 53217 18331988 ~ 18332237 (-)
G1671531 NA non-coding downstream 60850 18321107 ~ 18324604 (-)
G1671453 NA non-coding upstream 647 18388163 ~ 18391408 (-)
G1671548 NA non-coding upstream 4764 18392280 ~ 18398313 (-)
G1671554 NA non-coding upstream 71677 18459193 ~ 18465446 (-)
G1671555 NA non-coding upstream 72709 18460225 ~ 18466719 (-)
G1671557 NA non-coding upstream 98461 18485977 ~ 18510389 (-)
G1671478 NA other downstream 352612 18022444 ~ 18032842 (-)
G1670142 NA other downstream 690870 17687735 ~ 17694584 (-)
G1670145 NA other downstream 693588 17685976 ~ 17691866 (-)
G1670109 LOC105007702 other downstream 760006 17596615 ~ 17625448 (-)
G1671549 NA other upstream 12836 18400352 ~ 18406596 (-)
G1671550 NA other upstream 21608 18409124 ~ 18415464 (-)
G1671578 NA other upstream 178354 18565870 ~ 18624587 (-)
G1671580 NA other upstream 206537 18594053 ~ 18642884 (-)
G1671584 NA other upstream 243991 18631507 ~ 18632087 (-)

Expression


Co-expression Network