G1670254


Basic Information

Item Value
gene id G1670254
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18464276 ~ 18486211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1911040
tgctgatatggtttactgagtcaaacttctgctacaatgcaacgtccaaatcccacagctaagcaacgatgctaacgttagtggaattaaacttagcctagcgttactcctttgtccaatgaccttaggtacatgttatatttaaagggagaattagctctggaagccatctaaacgtgaatcgattctcagttgcagtaacgttacggttcttgaaataaatccctctaggttcatatcacatcaaaataatttcactaatgcaaaaaaatacacacctactgtacacggtcttaaccggttaacacagaacagtatttttcagtaacaacacgtttgtggcgtctgtcttcacacggagaaacagattgctaattagctcaggtagtccacct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1911040 True 395 lncRNA 0.39 2 18464276 18486211

Neighbor

gene id symbol gene type direction distance location
LOC118942046 NA coding upstream 621186 17838093 ~ 17843090 (+)
LOC118942045 NA coding upstream 848826 17607281 ~ 17615450 (+)
LOC118942044 NA coding upstream 859110 17600129 ~ 17605166 (+)
LOC118942043 NA coding upstream 877089 17580590 ~ 17587187 (+)
LOC118942042 LOC105021261 coding upstream 968535 17484324 ~ 17495741 (+)
LOC110499153 LOC106589263 coding downstream 608671 19094882 ~ 19201695 (+)
LOC110499151 LOC106589264 coding downstream 721041 19207252 ~ 19242695 (+)
LOC110499149 LOC106589267 coding downstream 808912 19295123 ~ 19303669 (+)
LOC110499145 LOC106589268 coding downstream 825159 19311370 ~ 19350990 (+)
LOC118942048 NA coding downstream 890028 19376239 ~ 19378591 (+)
G1670185 NA non-coding upstream 72398 18369646 ~ 18391878 (+)
G1670248 NA non-coding upstream 99398 18361120 ~ 18364878 (+)
G1670197 LOC106593034 non-coding upstream 101361 18336845 ~ 18362915 (+)
G1670238 LOC105021261 non-coding upstream 249865 18206793 ~ 18214411 (+)
G1670229 NA non-coding upstream 261281 18196135 ~ 18202995 (+)
G1670264 NA non-coding downstream 46062 18532273 ~ 18536108 (+)
G1670273 NA non-coding downstream 207730 18693941 ~ 18699795 (+)
G1670192 LOC105007702 non-coding downstream 217262 18703473 ~ 18725994 (+)
G1670187 NA non-coding downstream 265249 18751460 ~ 18752626 (+)
G1670186 NA non-coding downstream 266527 18752738 ~ 18753753 (+)
G1670209 LOC105007702 other upstream 343109 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 684902 17717036 ~ 17812707 (+)
G1670126 NA other upstream 690574 17767481 ~ 17773702 (+)
G1670129 NA other upstream 703464 17752294 ~ 17760812 (+)
G1670091 NA other upstream 887014 17572831 ~ 17577262 (+)
G1671091 NA other downstream 1741584 20227795 ~ 20228168 (+)
G1672918 NA other downstream 2603192 21089403 ~ 21089830 (+)
G1672973 NA other downstream 2654314 21140525 ~ 21191078 (+)
G1673044 NA other downstream 2810161 21296372 ~ 21296854 (+)

Expression


Co-expression Network