Gene
RNA
| Item | Value |
|---|---|
| gene id | G1671578 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 18565870 ~ 18624587 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| E3 ubiquitin-protein ligase CHIP-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1912546 | False | 398 | TUCP | 0.57 | 3 | 18565870 | 18617140 |
| TU1912547 | True | 359 | TUCP | 0.58 | 3 | 18565870 | 18624587 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942047 | NA | coding | downstream | 181412 | 18383865 ~ 18384458 (-) |
| LOC110512504 | NA | coding | downstream | 184223 | 18373775 ~ 18381647 (-) |
| LOC110498760 | stub1 | coding | downstream | 1113149 | 17442590 ~ 17452727 (-) |
| LOC110498759 | NA | coding | downstream | 1134814 | 17428615 ~ 17434040 (-) |
| LOC110499078 | LOC106578245 | coding | downstream | 1191555 | 17367169 ~ 17374315 (-) |
| LOC110498770 | LOC106589258 | coding | upstream | 129507 | 18754094 ~ 18887492 (-) |
| LOC110499157 | LOC106589261 | coding | upstream | 265483 | 18890070 ~ 19003867 (-) |
| LOC110499154 | LOC106589262 | coding | upstream | 429539 | 19054126 ~ 19095333 (-) |
| LOC110499148 | LOC106589265 | coding | upstream | 638404 | 19262991 ~ 19277123 (-) |
| LOC110499147 | LOC106589265 | coding | upstream | 652684 | 19277271 ~ 19294949 (-) |
| G1671572 | NA | non-coding | downstream | 21007 | 18538837 ~ 18544863 (-) |
| G1671562 | NA | non-coding | downstream | 42487 | 18515623 ~ 18523383 (-) |
| G1671557 | NA | non-coding | downstream | 55481 | 18485977 ~ 18510389 (-) |
| G1671555 | NA | non-coding | downstream | 99151 | 18460225 ~ 18466719 (-) |
| G1671554 | NA | non-coding | downstream | 100424 | 18459193 ~ 18465446 (-) |
| G1671587 | NA | non-coding | upstream | 28772 | 18653359 ~ 18658883 (-) |
| G1671588 | NA | non-coding | upstream | 29355 | 18653942 ~ 18661852 (-) |
| G1671591 | NA | non-coding | upstream | 41264 | 18665851 ~ 18680764 (-) |
| G1671469 | NA | non-coding | upstream | 49757 | 18674344 ~ 18738941 (-) |
| G1671592 | NA | non-coding | upstream | 55661 | 18680248 ~ 18686044 (-) |
| G1671550 | NA | other | downstream | 150406 | 18409124 ~ 18415464 (-) |
| G1671549 | NA | other | downstream | 159274 | 18400352 ~ 18406596 (-) |
| G1671478 | NA | other | downstream | 533028 | 18022444 ~ 18032842 (-) |
| G1670142 | NA | other | downstream | 871286 | 17687735 ~ 17694584 (-) |
| G1670145 | NA | other | downstream | 874004 | 17685976 ~ 17691866 (-) |
| G1671584 | NA | other | upstream | 6920 | 18631507 ~ 18632087 (-) |
| G1671859 | LOC106589268 | other | upstream | 702227 | 19326814 ~ 19406931 (-) |
| G1671895 | LOC107575789 | other | upstream | 807552 | 19432139 ~ 19435041 (-) |
| G1672381 | LOC106589294 | other | upstream | 1624872 | 20249459 ~ 20251165 (-) |
