G1670273


Basic Information

Item Value
gene id G1670273
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18693941 ~ 18699795 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1911063
agaatgggggtccagttccagcgcgtgcttgcagtccgccagggctttgtcgttctgcttgcagcttcacttggcacagagtacggttggtgtagtacaccgccactgaggggttacggttctgttggcaagatgtatacacacacacacaggtgcaaccacgcacgttaggcctacatattgcacaagctatttttgtaagagtgcatcagaccaagctacttctattctgacatctattcagagtaggtgaataggacagtgtcaatatctcatatcatatagactttcagtcatctgaaaaggtgtagacattttacatcatcattccc

Function

NR:

description
E3 ubiquitin-protein ligase CHIP-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1911063 True 332 lncRNA 0.46 2 18693941 18699795

Neighbor

gene id symbol gene type direction distance location
LOC118942046 NA coding upstream 850851 17838093 ~ 17843090 (+)
LOC118942045 NA coding upstream 1078491 17607281 ~ 17615450 (+)
LOC118942044 NA coding upstream 1088775 17600129 ~ 17605166 (+)
LOC118942043 NA coding upstream 1106754 17580590 ~ 17587187 (+)
LOC118942042 LOC105021261 coding upstream 1198200 17484324 ~ 17495741 (+)
LOC110499153 LOC106589263 coding downstream 395087 19094882 ~ 19201695 (+)
LOC110499151 LOC106589264 coding downstream 507457 19207252 ~ 19242695 (+)
LOC110499149 LOC106589267 coding downstream 595328 19295123 ~ 19303669 (+)
LOC110499145 LOC106589268 coding downstream 611575 19311370 ~ 19350990 (+)
LOC118942048 NA coding downstream 676444 19376239 ~ 19378591 (+)
G1670264 NA non-coding upstream 157833 18532273 ~ 18536108 (+)
G1670254 NA non-coding upstream 207730 18464276 ~ 18486211 (+)
G1670185 NA non-coding upstream 302063 18369646 ~ 18391878 (+)
G1670248 NA non-coding upstream 329063 18361120 ~ 18364878 (+)
G1670197 LOC106593034 non-coding upstream 331026 18336845 ~ 18362915 (+)
G1670192 LOC105007702 non-coding downstream 3678 18703473 ~ 18725994 (+)
G1670187 NA non-coding downstream 51665 18751460 ~ 18752626 (+)
G1670186 NA non-coding downstream 52943 18752738 ~ 18753753 (+)
G1670369 NA non-coding downstream 244852 18944647 ~ 18944883 (+)
G1670371 NA non-coding downstream 246472 18946267 ~ 18946564 (+)
G1670209 LOC105007702 other upstream 572774 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 914567 17717036 ~ 17812707 (+)
G1670126 NA other upstream 920239 17767481 ~ 17773702 (+)
G1670129 NA other upstream 933129 17752294 ~ 17760812 (+)
G1670091 NA other upstream 1116679 17572831 ~ 17577262 (+)
G1671091 NA other downstream 1528000 20227795 ~ 20228168 (+)
G1672918 NA other downstream 2389608 21089403 ~ 21089830 (+)
G1672973 NA other downstream 2440730 21140525 ~ 21191078 (+)
G1673044 NA other downstream 2596577 21296372 ~ 21296854 (+)

Expression


Co-expression Network