G1671462


Basic Information

Item Value
gene id G1671462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18750544 ~ 18751081 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1912354
cgagttcaacgagatgccccgcttgaccgtagctcgctctgagtgcagcgaccgtgaaaaaaagtaggcccaaaatgaagcctggccctaaatgtaatttgcttttgggtgacagtgagagaaccgttagggtgagaagcacaattcgacctgaggtcctcccgatctgtgcaagcctaaccttgaccgtgtggcattaacccttaacagtaaaacaggtttttttttgatctcacagattacaacgacatctctccccataggccATTGcttgctcctctaaagtcaacctgaagcctatgtgggttatgagtgggttatgaatgccttatgaacctgtcttcaatgacagtccatcaggacactatgaggtctacctgtgtcgattctaagcttcctgaagcaaccggaagtggttaaaatcaccctaaacatgtttttccatacccaaccagcagcttgtgataaatagtgcattcaaccctgtgtaaatcagtcagttcttaacttaactcaggattctgtaaaggcatacccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1912354 True 538 lncRNA 0.46 1 18750544 18751081

Neighbor

gene id symbol gene type direction distance location
LOC118942047 NA coding downstream 366086 18383865 ~ 18384458 (-)
LOC110512504 NA coding downstream 368897 18373775 ~ 18381647 (-)
LOC110498760 stub1 coding downstream 1297823 17442590 ~ 17452727 (-)
LOC110498759 NA coding downstream 1319488 17428615 ~ 17434040 (-)
LOC110499078 LOC106578245 coding downstream 1376229 17367169 ~ 17374315 (-)
LOC110498770 LOC106589258 coding upstream 3013 18754094 ~ 18887492 (-)
LOC110499157 LOC106589261 coding upstream 138989 18890070 ~ 19003867 (-)
LOC110499154 LOC106589262 coding upstream 303045 19054126 ~ 19095333 (-)
LOC110499148 LOC106589265 coding upstream 511910 19262991 ~ 19277123 (-)
LOC110499147 LOC106589265 coding upstream 526190 19277271 ~ 19294949 (-)
G1671471 NA non-coding downstream 1575 18748104 ~ 18748969 (-)
G1671469 NA non-coding downstream 11603 18674344 ~ 18738941 (-)
G1671592 NA non-coding downstream 64500 18680248 ~ 18686044 (-)
G1671591 NA non-coding downstream 69780 18665851 ~ 18680764 (-)
G1671588 NA non-coding downstream 88692 18653942 ~ 18661852 (-)
G1671455 NA non-coding upstream 859 18751940 ~ 18752644 (-)
G1671456 NA non-coding upstream 1681 18752762 ~ 18753791 (-)
G1671466 NA non-coding upstream 197581 18948662 ~ 18948997 (-)
G1671467 NA non-coding upstream 198288 18949369 ~ 18949735 (-)
G1671652 NA non-coding upstream 212072 18963153 ~ 18963670 (-)
G1671580 NA other downstream 107660 18594053 ~ 18642884 (-)
G1671584 NA other downstream 118457 18631507 ~ 18632087 (-)
G1671578 NA other downstream 125957 18565870 ~ 18624587 (-)
G1671550 NA other downstream 335080 18409124 ~ 18415464 (-)
G1671549 NA other downstream 343948 18400352 ~ 18406596 (-)
G1671859 LOC106589268 other upstream 575733 19326814 ~ 19406931 (-)
G1671895 LOC107575789 other upstream 681058 19432139 ~ 19435041 (-)
G1672381 LOC106589294 other upstream 1498378 20249459 ~ 20251165 (-)
G1672588 NA other upstream 1869661 20620742 ~ 20670417 (-)

Expression


Co-expression Network