G1670187


Basic Information

Item Value
gene id G1670187
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18751460 ~ 18752626 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1910945
agttacagatccagttgcagcgtgttcatacgaatctttttaaagtgtgcttctGAGTTctacgagatttctgtgattttctgaaataacacacactcactaaacactctagccacctggaaatgcaaatgcgctacgctaaatgctaatagtactcattaaaactcaaacgttcactAAAACACAGGGTATTGAtataaagctacactcgttgtgaatctagccaacaagtcagatttttaaaatgcttttcggcgaaagctattatctgatagcatgcaacaccccaaaatacctgaaggcgaCATAAACAAAAGAATttgcgtagccggcgctacacaaatagcagaaataaaatataaaacattcattacctttgacgagcttctttgttggcactcctatatgccccataaacatcactattgggtcttttttttcgattaaatcggtccatatatacccaaaatatccatctatggaaactgtgattcagaaaaaaacagtTTCAAAACGCagggtcatttttttaaattaaaaagtttgacgataaactttcacaaaacacttcgaaatacttttgtaatccaactttaggtattagtaaacgttaataatctatcaaattgatcacggggcgatgtgtattcaatagctccacgtcttcaaatcatgttcggaaatctctcttccaaaacttcctgtcggagaccggatggaatggggtctctctcctttgtttgaccaagaaataactTCCAGGAAATtgacaagactggcgacatcgtgtggaagctgtaggaattgcaatctcagcaccatttaatttggtgtcccttaaacatgacatgcaagtggcgcatggatattttttccagttttcagtgaccagtttttcttgcgcttttcgatgaaacacacgctctgttatagccacagccgtgatttaactaGTTTTAGAAAcgtgagtgttttctatccacacatactaatcatatgcatatactatattcctggcatgagtagcaggacgctgaaatgttgcacgatttttaacagaatgttcgaaaaagtagggggtaggcttaacacttaaaactcaggattctgtaaagggcataccccaatgaggatatgtgtttacctatagcttcctgtgccaaccgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1910945 True 1167 lncRNA 0.38 1 18751460 18752626

Neighbor

gene id symbol gene type direction distance location
LOC118942046 NA coding upstream 908370 17838093 ~ 17843090 (+)
LOC118942045 NA coding upstream 1136010 17607281 ~ 17615450 (+)
LOC118942044 NA coding upstream 1146294 17600129 ~ 17605166 (+)
LOC118942043 NA coding upstream 1164273 17580590 ~ 17587187 (+)
LOC118942042 LOC105021261 coding upstream 1255719 17484324 ~ 17495741 (+)
LOC110499153 LOC106589263 coding downstream 342256 19094882 ~ 19201695 (+)
LOC110499151 LOC106589264 coding downstream 454626 19207252 ~ 19242695 (+)
LOC110499149 LOC106589267 coding downstream 542497 19295123 ~ 19303669 (+)
LOC110499145 LOC106589268 coding downstream 558744 19311370 ~ 19350990 (+)
LOC118942048 NA coding downstream 623613 19376239 ~ 19378591 (+)
G1670201 NA non-coding upstream 8473 18371226 ~ 18742987 (+)
G1670192 LOC105007702 non-coding upstream 25466 18703473 ~ 18725994 (+)
G1670273 NA non-coding upstream 51665 18693941 ~ 18699795 (+)
G1670264 NA non-coding upstream 215352 18532273 ~ 18536108 (+)
G1670254 NA non-coding upstream 265249 18464276 ~ 18486211 (+)
G1670186 NA non-coding downstream 112 18752738 ~ 18753753 (+)
G1670369 NA non-coding downstream 192021 18944647 ~ 18944883 (+)
G1670371 NA non-coding downstream 193641 18946267 ~ 18946564 (+)
G1670378 NA non-coding downstream 298994 19051620 ~ 19051951 (+)
G1670375 NA non-coding downstream 299979 19052605 ~ 19052677 (+)
G1670209 LOC105007702 other upstream 630293 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 972086 17717036 ~ 17812707 (+)
G1670126 NA other upstream 977758 17767481 ~ 17773702 (+)
G1670129 NA other upstream 990648 17752294 ~ 17760812 (+)
G1670091 NA other upstream 1174198 17572831 ~ 17577262 (+)
G1671091 NA other downstream 1475169 20227795 ~ 20228168 (+)
G1672918 NA other downstream 2336777 21089403 ~ 21089830 (+)
G1672973 NA other downstream 2387899 21140525 ~ 21191078 (+)
G1673044 NA other downstream 2543746 21296372 ~ 21296854 (+)

Expression


Co-expression Network