G1671456


Basic Information

Item Value
gene id G1671456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18752762 ~ 18753791 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1912348
ccacaCCTTGTATTTAATAACAAGTTAACCCTCCTTTGCCAGCAATTAACCTCAACCGaaagttttctgtagttgcggatcagaccttcaaaggtcaggaggaattttggaccatacACTTTTaccaaactgtttcagttcaacaaTATTTGTAGGATgcctggtgtgaaccgctctcgggTTCATGTCACAGCATTTTAAATCTGCTTAAAGTCGGGAAGTCGGGACTGGGCcatcttctgttgaagccattctgttgttgatttacttctgtcttttgggtcattgtcctctgttgcatcacccaacttcttttGCGCTTCAATTGGCAGACGGATAGCTTTACATTCATTCTTCACATAAGACAATGCTTCTTGTAAATAGCAAACTTAAATTGTGATTTTttaatagggcaaggcagctcgaACCAACATCTctgatcttgtctcattgattggactggacagttttcagcaagttgcaacattgaaataaccacttttccataaacaagctctaaatcatgtttgctgtgctgtctatttaaGATGAAATGAACACTGGACGGTTTTCGGCAAGttgaaaaaacagaaataaccacttttccataaacaagctctaaattcttgtttgatgcactctggatgaaAATTTTttttgtgctgtctatttgagatgaaattaacactggacagttttcagcaagttgcaacattgaaatacagttatagacacttttccataaacaaggtctataaCATGTTTGATGCAATTGGCAAGTAAAATTTTGTCCACACCTGCGTTTTTGGGATGTTAGGAACACTGTCAACAAATTTCAGCAAGAGGTATTGTAAGAgaacacccccctgaaatggacaaaaatgaatgggaagtcattggcacttgacaaaccatatacacggtgtccaatacAACTCAATTCGGCGTCGTTTCGTTCAAAGTTGAttgccatatggcaaatgccaggtgtaaacactttaaaaatccaacaggtgtgtgtgtgagcttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1912348 True 1030 lncRNA 0.39 1 18752762 18753791

Neighbor

gene id symbol gene type direction distance location
LOC118942047 NA coding downstream 368304 18383865 ~ 18384458 (-)
LOC110512504 NA coding downstream 371115 18373775 ~ 18381647 (-)
LOC110498760 stub1 coding downstream 1300041 17442590 ~ 17452727 (-)
LOC110498759 NA coding downstream 1321706 17428615 ~ 17434040 (-)
LOC110499078 LOC106578245 coding downstream 1378447 17367169 ~ 17374315 (-)
LOC110498770 LOC106589258 coding upstream 303 18754094 ~ 18887492 (-)
LOC110499157 LOC106589261 coding upstream 136279 18890070 ~ 19003867 (-)
LOC110499154 LOC106589262 coding upstream 300335 19054126 ~ 19095333 (-)
LOC110499148 LOC106589265 coding upstream 509200 19262991 ~ 19277123 (-)
LOC110499147 LOC106589265 coding upstream 523480 19277271 ~ 19294949 (-)
G1671455 NA non-coding downstream 118 18751940 ~ 18752644 (-)
G1671462 NA non-coding downstream 1681 18750544 ~ 18751081 (-)
G1671471 NA non-coding downstream 3793 18748104 ~ 18748969 (-)
G1671469 NA non-coding downstream 13821 18674344 ~ 18738941 (-)
G1671592 NA non-coding downstream 66718 18680248 ~ 18686044 (-)
G1671466 NA non-coding upstream 194871 18948662 ~ 18948997 (-)
G1671467 NA non-coding upstream 195578 18949369 ~ 18949735 (-)
G1671652 NA non-coding upstream 209362 18963153 ~ 18963670 (-)
G1671690 NA non-coding upstream 281345 19035136 ~ 19035450 (-)
G1671696 NA non-coding upstream 288410 19042201 ~ 19042784 (-)
G1671580 NA other downstream 109878 18594053 ~ 18642884 (-)
G1671584 NA other downstream 120675 18631507 ~ 18632087 (-)
G1671578 NA other downstream 128175 18565870 ~ 18624587 (-)
G1671550 NA other downstream 337298 18409124 ~ 18415464 (-)
G1671549 NA other downstream 346166 18400352 ~ 18406596 (-)
G1671859 LOC106589268 other upstream 573023 19326814 ~ 19406931 (-)
G1671895 LOC107575789 other upstream 678348 19432139 ~ 19435041 (-)
G1672381 LOC106589294 other upstream 1495668 20249459 ~ 20251165 (-)
G1672588 NA other upstream 1866951 20620742 ~ 20670417 (-)

Expression


Co-expression Network