G1671859 (LOC106589268)


Basic Information

Item Value
gene id G1671859
gene name LOC106589268
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 19326814 ~ 19406931 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1912865
gtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgttttgaGgttgtggacaggtgtcttttatactgataacaagttcaaacaggtgccattaatacaggtaacgagtggaggacagaggagcctcttaaagaagtagttacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaatacttattttccaccataatttgcaaataaattcattaaaaatcctacaatgtgattttctggatttttttctcattttgtctgtcatagttgaagtgtacctatgatgaaaattacaggcctctctcatctttttaagtgtgagaacttgcacaattggtggctgactaaatacatttttgccccactgtatatgaatgtgtCACTGCAAAAAGAACCCTGAAAAGAATCCTGCTTAAATCTATGGAAACTAGGATGTGACTCGACTACAATACCTCCAGCATGAAGCACCGATGTCATTATAGAAGGCACCCAGGAGGTCTCTTGGTTGCTGGCCTGGAACTCTGTTTGTAGGTCCGTGTAGAAGATGCCCATGCAGGAGGGGAAGGCCAGAGTCAAGGCGAGCACCAGGATGGTGGCCaccagcaccacccagccccaaCCCCCGTCAGGTGCAGTGACGGTCCCATCCATAGCCAGAGGGTTTATGGGTTCAGATTTGCCATTCTCCACCTCCTCAGAGTCCATGATCTCGCCATTCTTCTGCTCCATGCTGGGTGCCTGCTCCGGGGCCTTGCTCTCCATCTGGAAGCTGTCACAGTCCCCTGCCACCTTGTTGCCATTCCTCCGGTTCATACTCTTCTCAGATGCTGAGGCAATGCCCTAGTAGTTTGCCAGGGTGGATGACACTCACTAGTATATTCCATCTCACCatgtctctcc

Function

NR:

description
monocarboxylate transporter 6-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1912865 True 969 TUCP 0.47 2 19326814 19406931

Neighbor

gene id symbol gene type direction distance location
LOC110499146 NA coding downstream 14513 19305650 ~ 19312301 (-)
LOC110499150 NA coding downstream 21215 19304115 ~ 19305599 (-)
LOC110499147 LOC106589265 coding downstream 31865 19277271 ~ 19294949 (-)
LOC110499148 LOC106589265 coding downstream 49691 19262991 ~ 19277123 (-)
LOC110499154 LOC106589262 coding downstream 231481 19054126 ~ 19095333 (-)
LOC110498769 LOC106589273 coding upstream 31660 19438591 ~ 19555924 (-)
LOC110499140 LOC106589275 coding upstream 177953 19584884 ~ 19613597 (-)
LOC110499139 NA coding upstream 207611 19614542 ~ 19640508 (-)
LOC110499136 LOC106589278 coding upstream 255626 19662557 ~ 19670039 (-)
LOC110499132 calcoco2 coding upstream 289304 19696235 ~ 19706467 (-)
G1671848 NA non-coding downstream 22717 19299958 ~ 19304097 (-)
G1671831 NA non-coding downstream 69962 19256463 ~ 19256852 (-)
G1671830 NA non-coding downstream 71341 19255051 ~ 19255473 (-)
G1671829 NA non-coding downstream 72066 19254122 ~ 19254748 (-)
G1671776 NA non-coding downstream 73804 19241068 ~ 19253010 (-)
G1672002 NA non-coding upstream 239929 19646860 ~ 19647148 (-)
G1672003 NA non-coding upstream 240267 19647198 ~ 19647493 (-)
G1672004 NA non-coding upstream 240909 19647840 ~ 19648067 (-)
G1672006 NA non-coding upstream 242090 19649021 ~ 19649230 (-)
G1672023 NA non-coding upstream 277020 19683951 ~ 19684278 (-)
G1671580 NA other downstream 683930 18594053 ~ 18642884 (-)
G1671584 NA other downstream 694727 18631507 ~ 18632087 (-)
G1671578 NA other downstream 702227 18565870 ~ 18624587 (-)
G1671550 NA other downstream 911350 18409124 ~ 18415464 (-)
G1671895 LOC107575789 other upstream 25208 19432139 ~ 19435041 (-)
G1672381 LOC106589294 other upstream 842528 20249459 ~ 20251165 (-)
G1672588 NA other upstream 1213811 20620742 ~ 20670417 (-)
G1672649 dhx8 other upstream 1322344 20729275 ~ 20730072 (-)
phf5a LOC102780084 other upstream 2182098 21589006 ~ 21596518 (-)

Expression


Co-expression Network