G1670526


Basic Information

Item Value
gene id G1670526
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 19389269 ~ 19397202 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1911339
ttcagttgtaacaaaaaggcagtttattgagtcaaaagatatcttgtcctgcagTTTAACGTGCACGGACCTGATTCATATAGCTCAGAAGGAGTTAGCTGAAAAAGGGGCTTAGACAAAGGTTACAGCAGTTTTtatacatggaataatgtaggtAGAGTCTTGTCGTGTCGCCTTCTGAATGGTCCCGAAGGGTTGGAGGCGGAcctgctctagccagagcaggagccccattggtgcacagcagagtcTTCTGCTCTgggcacccgaccagtagagggggaatgaagtgtgtgtgtttatgcaagaAGGTATTTGTGTGTCAGGGGATCGTGAGGTAGGGGGAACTGAGAGGGGCAGTTTtatggctgggtgtgtgtgttcgtgcgatggaatgtctgtgtgtgtcctgggGTCGTGAGATAAGAGAACTGAGAGGGGCAGTTTATGGTTGGGTATATGTGTTCGTTCCTGTTTGGGCAGGGATACGTGCAATGACTTGAGTCAAGCGGATAAGTTTGGCGCTGTataatatatgagctatgtgtatgaatatatgtatatatgacaGTTGTCAATCGGGCGGTCATGTGTGTTGGCGAGGCAGCGGACCCTGGTTCAAGCCATAGGGCAGCGCCTTTGAGGGCTTCCCCcattttaatcaaatcaaatcaaatttatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaaccca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1911339 True 735 lncRNA 0.47 2 19389269 19397202

Neighbor

gene id symbol gene type direction distance location
LOC118942048 NA coding upstream 10678 19376239 ~ 19378591 (+)
LOC110499145 LOC106589268 coding upstream 38279 19311370 ~ 19350990 (+)
LOC110499149 LOC106589267 coding upstream 85600 19295123 ~ 19303669 (+)
LOC110499151 LOC106589264 coding upstream 146574 19207252 ~ 19242695 (+)
LOC110499153 LOC106589263 coding upstream 187574 19094882 ~ 19201695 (+)
LOC110499141 LOC106589274 coding downstream 171770 19568972 ~ 19583925 (+)
LOC110499137 LOC106589279 coding downstream 256945 19654147 ~ 19660703 (+)
LOC110499134 gip coding downstream 277975 19675177 ~ 19676923 (+)
LOC110499133 snf8 coding downstream 288206 19685408 ~ 19696205 (+)
LOC110499131 NA coding downstream 315305 19712507 ~ 19718036 (+)
G1670521 NA non-coding upstream 131117 19257917 ~ 19258152 (+)
G1670482 NA non-coding upstream 237436 19151545 ~ 19151833 (+)
G1670470 NA non-coding upstream 251703 19137353 ~ 19137566 (+)
G1670375 NA non-coding upstream 336592 19052605 ~ 19052677 (+)
G1670694 NA non-coding downstream 159774 19556976 ~ 19557280 (+)
G1670705 NA non-coding downstream 168451 19565653 ~ 19565940 (+)
G1670747 NA non-coding downstream 247414 19644616 ~ 19644835 (+)
G1670749 NA non-coding downstream 250221 19647423 ~ 19647694 (+)
G1670750 NA non-coding downstream 250690 19647892 ~ 19648124 (+)
G1670209 LOC105007702 other upstream 1268102 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 1609895 17717036 ~ 17812707 (+)
G1671091 NA other downstream 830593 20227795 ~ 20228168 (+)
G1672918 NA other downstream 1692201 21089403 ~ 21089830 (+)
G1672973 NA other downstream 1743323 21140525 ~ 21191078 (+)
G1673044 NA other downstream 1899170 21296372 ~ 21296854 (+)
G1673063 NA other downstream 1919596 21316798 ~ 21317412 (+)

Expression


Co-expression Network