G1670783


Basic Information

Item Value
gene id G1670783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 19720785 ~ 19721072 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1911615
ATTGAAACAGTCGGAGTACTgattataaaaaatataattgtattattGGCCTTTTTGAATGCCTAGAAATCTTTAATATAGGTTATCCATTTGTTGTTAGAAATATATCATAAGATGTAGGCTGTGTCTTCTTATATACGATCCAGTTAACTAGCCAATGCATCAACATTCTCTATTATCTCAGCAAATTCTCTTCACAGTTGAATACTTGTATCAGGTTCGATCTCCCCTTATCTCCCTTCATCACCCCCTCCTTCTTtcttcctctttccccctctgttGGTTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1911615 True 288 lncRNA 0.35 1 19720785 19721072

Neighbor

gene id symbol gene type direction distance location
LOC110499131 NA coding upstream 2749 19712507 ~ 19718036 (+)
LOC110499133 snf8 coding upstream 24580 19685408 ~ 19696205 (+)
LOC110499134 gip coding upstream 43862 19675177 ~ 19676923 (+)
LOC110499137 LOC106589279 coding upstream 60082 19654147 ~ 19660703 (+)
LOC110499141 LOC106589274 coding upstream 136860 19568972 ~ 19583925 (+)
LOC110499130 LOC106589285 coding downstream 5517 19726589 ~ 19728624 (+)
LOC110499129 LOC106589284 coding downstream 7700 19728772 ~ 19731361 (+)
LOC110498767 NA coding downstream 37816 19758888 ~ 19761562 (+)
LOC110498765 LOC106589283 coding downstream 76678 19797750 ~ 19842089 (+)
LOC110499126 cbx1 coding downstream 157901 19878973 ~ 19886391 (+)
G1670780 NA non-coding upstream 8472 19712097 ~ 19712313 (+)
G1670765 NA non-coding upstream 49775 19670675 ~ 19671010 (+)
G1670755 NA non-coding upstream 68701 19651884 ~ 19652084 (+)
G1670750 NA non-coding upstream 72661 19647892 ~ 19648124 (+)
G1670801 NA non-coding downstream 24361 19745433 ~ 19745654 (+)
G1670894 NA non-coding downstream 157328 19878400 ~ 19878689 (+)
G1670904 NA non-coding downstream 185734 19906806 ~ 19907730 (+)
G1671244 NA non-coding downstream 791948 20513020 ~ 20513264 (+)
LOC110499153 LOC106589263 other upstream 595549 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 1599618 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 1941411 17717036 ~ 17812707 (+)
G1671091 NA other downstream 506723 20227795 ~ 20228168 (+)
G1672918 NA other downstream 1368331 21089403 ~ 21089830 (+)
G1672973 NA other downstream 1419453 21140525 ~ 21191078 (+)
G1673044 NA other downstream 1575300 21296372 ~ 21296854 (+)
G1673063 NA other downstream 1595726 21316798 ~ 21317412 (+)

Expression


Co-expression Network