Gene
RNA
| Item | Value |
|---|---|
| gene id | G1672414 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 20313267 ~ 20314911 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1913477 | True | 1451 | lncRNA | 0.42 | 3 | 20313267 | 20314911 |
20,310,400
20,310,800
20,311,200
20,311,600
20,312,000
20,312,400
20,312,800
20,313,200
20,313,600
20,314,000
20,314,000
20,314,400
20,314,800
20,315,200
20,315,600
20,316,000
20,316,400
20,316,800
20,317,200
20,317,600
NC_048584.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499118 | LOC106589297 | coding | downstream | 4493 | 20297544 ~ 20308774 (-) |
| trnaa-ugc-145 | NA | coding | downstream | 146562 | 20166636 ~ 20166705 (-) |
| LOC110499121 | LOC106589293 | coding | downstream | 186680 | 20013073 ~ 20126587 (-) |
| LOC110499122 | LOC106589292 | coding | downstream | 351911 | 19941466 ~ 19961356 (-) |
| LOC110499124 | LOC106589290 | coding | downstream | 399397 | 19907335 ~ 19913870 (-) |
| LOC110499116 | wnt3 | coding | upstream | 54085 | 20368996 ~ 20407349 (-) |
| LOC110499110 | LOC106589303 | coding | upstream | 451212 | 20766123 ~ 20807510 (-) |
| LOC110499109 | LOC106589309 | coding | upstream | 547439 | 20862350 ~ 20872069 (-) |
| LOC118941997 | LOC106589179 | coding | upstream | 640288 | 20955199 ~ 20957806 (-) |
| LOC118942009 | NA | coding | upstream | 663312 | 20978223 ~ 20979539 (-) |
| G1672363 | NA | non-coding | downstream | 82986 | 20227204 ~ 20230281 (-) |
| G1672294 | NA | non-coding | downstream | 184255 | 20114541 ~ 20129012 (-) |
| G1672173 | NA | non-coding | downstream | 272010 | 19943973 ~ 20041257 (-) |
| G1672119 | NA | non-coding | downstream | 342754 | 19905197 ~ 19970513 (-) |
| G1672518 | NA | non-coding | upstream | 185492 | 20500403 ~ 20500608 (-) |
| G1672519 | NA | non-coding | upstream | 186857 | 20501768 ~ 20501975 (-) |
| G1672522 | NA | non-coding | upstream | 189345 | 20504256 ~ 20504466 (-) |
| G1672533 | NA | non-coding | upstream | 197331 | 20512242 ~ 20512962 (-) |
| G1672534 | NA | non-coding | upstream | 198643 | 20513554 ~ 20513796 (-) |
| G1672381 | LOC106589294 | other | downstream | 62102 | 20249459 ~ 20251165 (-) |
| G1671895 | LOC107575789 | other | downstream | 878226 | 19432139 ~ 19435041 (-) |
| G1671859 | LOC106589268 | other | downstream | 906336 | 19326814 ~ 19406931 (-) |
| LOC110499154 | LOC106589262 | other | downstream | 1240080 | 19054126 ~ 19095333 (-) |
| G1671584 | NA | other | downstream | 1681180 | 18631507 ~ 18632087 (-) |
| G1672588 | NA | other | upstream | 305831 | 20620742 ~ 20670417 (-) |
| G1672649 | dhx8 | other | upstream | 414364 | 20729275 ~ 20730072 (-) |
| phf5a | LOC102780084 | other | upstream | 1274118 | 21589006 ~ 21596518 (-) |
| G1673740 | LOC106589538 | other | upstream | 1521422 | 21836333 ~ 21844793 (-) |
| G1674299 | NA | other | upstream | 2016439 | 22331350 ~ 22331806 (-) |
