Gene
RNA
| Item | Value |
|---|---|
| gene id | G1672534 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 20513554 ~ 20513796 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1913600 | True | 243 | lncRNA | 0.37 | 1 | 20513554 | 20513796 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499116 | wnt3 | coding | downstream | 106205 | 20368996 ~ 20407349 (-) |
| LOC110499118 | LOC106589297 | coding | downstream | 204780 | 20297544 ~ 20308774 (-) |
| trnaa-ugc-145 | NA | coding | downstream | 346849 | 20166636 ~ 20166705 (-) |
| LOC110499121 | LOC106589293 | coding | downstream | 386967 | 20013073 ~ 20126587 (-) |
| LOC110499122 | LOC106589292 | coding | downstream | 552198 | 19941466 ~ 19961356 (-) |
| LOC110499110 | LOC106589303 | coding | upstream | 252327 | 20766123 ~ 20807510 (-) |
| LOC110499109 | LOC106589309 | coding | upstream | 348554 | 20862350 ~ 20872069 (-) |
| LOC118941997 | LOC106589179 | coding | upstream | 441403 | 20955199 ~ 20957806 (-) |
| LOC118942009 | NA | coding | upstream | 464427 | 20978223 ~ 20979539 (-) |
| LOC110499105 | LOC106589523 | coding | upstream | 677815 | 21191611 ~ 21214252 (-) |
| G1672533 | NA | non-coding | downstream | 592 | 20512242 ~ 20512962 (-) |
| G1672522 | NA | non-coding | downstream | 9088 | 20504256 ~ 20504466 (-) |
| G1672519 | NA | non-coding | downstream | 11579 | 20501768 ~ 20501975 (-) |
| G1672518 | NA | non-coding | downstream | 12946 | 20500403 ~ 20500608 (-) |
| G1672414 | NA | non-coding | downstream | 198643 | 20313267 ~ 20314911 (-) |
| G1672535 | NA | non-coding | upstream | 1830 | 20515626 ~ 20515832 (-) |
| G1672541 | NA | non-coding | upstream | 10405 | 20524201 ~ 20524434 (-) |
| G1672546 | NA | non-coding | upstream | 19685 | 20533481 ~ 20533909 (-) |
| G1672557 | NA | non-coding | upstream | 49118 | 20562914 ~ 20563148 (-) |
| G1672566 | NA | non-coding | upstream | 60509 | 20574305 ~ 20574531 (-) |
| G1672381 | LOC106589294 | other | downstream | 262389 | 20249459 ~ 20251165 (-) |
| G1671895 | LOC107575789 | other | downstream | 1078513 | 19432139 ~ 19435041 (-) |
| G1671859 | LOC106589268 | other | downstream | 1106623 | 19326814 ~ 19406931 (-) |
| LOC110499154 | LOC106589262 | other | downstream | 1440367 | 19054126 ~ 19095333 (-) |
| G1671584 | NA | other | downstream | 1881467 | 18631507 ~ 18632087 (-) |
| G1672588 | NA | other | upstream | 106946 | 20620742 ~ 20670417 (-) |
| G1672649 | dhx8 | other | upstream | 215479 | 20729275 ~ 20730072 (-) |
| phf5a | LOC102780084 | other | upstream | 1075233 | 21589006 ~ 21596518 (-) |
| G1673740 | LOC106589538 | other | upstream | 1322537 | 21836333 ~ 21844793 (-) |
| G1674299 | NA | other | upstream | 1817554 | 22331350 ~ 22331806 (-) |
