G1671279


Basic Information

Item Value
gene id G1671279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 20553314 ~ 20553538 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1912154
tttttgtttgtccactcgcctcttgaggattgaccacaagttctcaatcagattaaggtctggggatttTCCTGACTTTGCtattaattgcaattcataacattctggagtatatgcaaattgccatcatacaaactgaggcagcagactttttgaaaattaatatttgtgtcattctcaaaacctttggccacgactgtactataGTCTTGTAGTAGATGCGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1912154 True 225 lncRNA 0.38 1 20553314 20553538

Neighbor

gene id symbol gene type direction distance location
LOC110499115 LOC106589298 coding upstream 184038 20319484 ~ 20369276 (+)
LOC110499117 LOC106589296 coding upstream 238404 20308748 ~ 20314910 (+)
LOC110499120 LOC106589294 coding upstream 262173 20172414 ~ 20291141 (+)
LOC110499123 LOC106589291 coding upstream 614993 19915972 ~ 19938321 (+)
LOC110498763 NA coding upstream 638053 19914464 ~ 19915261 (+)
LOC110499114 LOC105007436 coding downstream 100926 20654464 ~ 20688063 (+)
LOC110499112 LOC106589300 coding downstream 152861 20706399 ~ 20735339 (+)
LOC110499111 LOC106589301 coding downstream 181894 20735432 ~ 20764082 (+)
LOC110499108 LOC106578253 coding downstream 449113 21002651 ~ 21040111 (+)
LOC110499107 LOC106578254 coding downstream 600997 21154535 ~ 21168654 (+)
G1671278 NA non-coding upstream 322 20552783 ~ 20552992 (+)
G1671259 NA non-coding upstream 23770 20529228 ~ 20529544 (+)
G1671252 NA non-coding upstream 31202 20521815 ~ 20522112 (+)
G1671251 NA non-coding upstream 31517 20521581 ~ 20521797 (+)
G1671247 NA non-coding upstream 35782 20517314 ~ 20517532 (+)
G1671235 NA non-coding downstream 144629 20698167 ~ 20699165 (+)
G1671391 NA non-coding downstream 202953 20756491 ~ 20770444 (+)
G1672761 NA non-coding downstream 347235 20900773 ~ 20901240 (+)
G1672762 NA non-coding downstream 347794 20901332 ~ 20901794 (+)
G1671091 NA other upstream 325146 20227795 ~ 20228168 (+)
LOC110499153 LOC106589263 other upstream 1428078 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 2432147 18051611 ~ 18132470 (+)
G1670126 NA other upstream 2779612 17767481 ~ 17773702 (+)
G1670129 NA other upstream 2792502 17752294 ~ 17760812 (+)
G1672918 NA other downstream 535865 21089403 ~ 21089830 (+)
G1672973 NA other downstream 586987 21140525 ~ 21191078 (+)
G1673044 NA other downstream 742834 21296372 ~ 21296854 (+)
G1673063 NA other downstream 763260 21316798 ~ 21317412 (+)
G1673204 NA other downstream 832791 21386329 ~ 21389778 (+)

Expression


Co-expression Network