G1672588


Basic Information

Item Value
gene id G1672588
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 20620742 ~ 20670417 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1913660
tgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcatttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaatttaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttctttcggcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggtt
>TU1913661
ggacagggaagatggttaaaattgatgggaagatggatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1913660 False 524 TUCP 0.43 2 20620742 20670417
TU1913661 True 168 lncRNA 0.41 2 20620742 20670063

Neighbor

gene id symbol gene type direction distance location
LOC110499116 wnt3 coding downstream 213393 20368996 ~ 20407349 (-)
LOC110499118 LOC106589297 coding downstream 311968 20297544 ~ 20308774 (-)
trnaa-ugc-145 NA coding downstream 454037 20166636 ~ 20166705 (-)
LOC110499121 LOC106589293 coding downstream 494155 20013073 ~ 20126587 (-)
LOC110499122 LOC106589292 coding downstream 659386 19941466 ~ 19961356 (-)
LOC110499110 LOC106589303 coding upstream 96060 20766123 ~ 20807510 (-)
LOC110499109 LOC106589309 coding upstream 192287 20862350 ~ 20872069 (-)
LOC118941997 LOC106589179 coding upstream 285136 20955199 ~ 20957806 (-)
LOC118942009 NA coding upstream 308160 20978223 ~ 20979539 (-)
LOC110499105 LOC106589523 coding upstream 521548 21191611 ~ 21214252 (-)
G1672578 NA non-coding downstream 23070 20597437 ~ 20597672 (-)
G1672566 NA non-coding downstream 46211 20574305 ~ 20574531 (-)
G1672557 NA non-coding downstream 57594 20562914 ~ 20563148 (-)
G1672546 NA non-coding downstream 86833 20533481 ~ 20533909 (-)
G1672541 NA non-coding downstream 96308 20524201 ~ 20524434 (-)
G1672618 NA non-coding upstream 1093 20671156 ~ 20773751 (-)
G1672636 NA non-coding upstream 43256 20713319 ~ 20737201 (-)
G1672696 NA non-coding upstream 141098 20811161 ~ 20811373 (-)
G1672743 NA non-coding upstream 205568 20875631 ~ 20875869 (-)
G1672750 NA non-coding upstream 210015 20880078 ~ 20880415 (-)
G1672381 LOC106589294 other downstream 369577 20249459 ~ 20251165 (-)
G1671895 LOC107575789 other downstream 1185701 19432139 ~ 19435041 (-)
G1671859 LOC106589268 other downstream 1213811 19326814 ~ 19406931 (-)
LOC110499154 LOC106589262 other downstream 1547555 19054126 ~ 19095333 (-)
G1671584 NA other downstream 1988655 18631507 ~ 18632087 (-)
G1672649 dhx8 other upstream 59212 20729275 ~ 20730072 (-)
phf5a LOC102780084 other upstream 918966 21589006 ~ 21596518 (-)
G1673740 LOC106589538 other upstream 1166270 21836333 ~ 21844793 (-)
G1674299 NA other upstream 1661287 22331350 ~ 22331806 (-)
LOC118942052 mkl2 other upstream 1716260 22386323 ~ 22391573 (-)
G1671580 NA other downstream 1977858 18594053 ~ 18642884 (-)

Expression


Co-expression Network