G1671391


Basic Information

Item Value
gene id G1671391
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 20756491 ~ 20770444 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1912275
agcatggggggtggcagcatcatgttgtgggggtgctttgctgcagcatCTTTTTTGTTGTgaattttttctccccaatttcgtggtatccaattgttagtagctaccatcttgtctcatcgctacaactcccgtacgggctcagagagacgaaggttgaaagtcacgtgtcctccgatacacaacccaaccaagccacactgcttcttaacacagcgcgcatccaacccggaagccagccgtaccaatgtgtcggaggaaacacttggttagcgcgcactgcgcccggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1912275 True 291 lncRNA 0.53 2 20756491 20770444

Neighbor

gene id symbol gene type direction distance location
LOC110499112 LOC106589300 coding upstream 21152 20706399 ~ 20735339 (+)
LOC110499114 LOC105007436 coding upstream 68428 20654464 ~ 20688063 (+)
LOC118942050 NA coding upstream 112423 20493325 ~ 20644068 (+)
LOC110499115 LOC106589298 coding upstream 387215 20319484 ~ 20369276 (+)
LOC110499117 LOC106589296 coding upstream 441581 20308748 ~ 20314910 (+)
LOC110499108 LOC106578253 coding downstream 232207 21002651 ~ 21040111 (+)
LOC110499107 LOC106578254 coding downstream 384091 21154535 ~ 21168654 (+)
trnal-uag-53 NA coding downstream 458079 21228523 ~ 21228604 (+)
LOC110499104 LOC106589524 coding downstream 463767 21234211 ~ 21277617 (+)
LOC110499103 LOC106589525 coding downstream 561850 21332294 ~ 21377525 (+)
G1671235 NA non-coding upstream 57326 20698167 ~ 20699165 (+)
G1671279 NA non-coding upstream 202953 20553314 ~ 20553538 (+)
G1671278 NA non-coding upstream 203499 20552783 ~ 20552992 (+)
G1671259 NA non-coding upstream 226947 20529228 ~ 20529544 (+)
G1672761 NA non-coding downstream 130329 20900773 ~ 20901240 (+)
G1672762 NA non-coding downstream 130888 20901332 ~ 20901794 (+)
G1672763 NA non-coding downstream 131486 20901930 ~ 20902289 (+)
G1672765 NA non-coding downstream 145321 20915765 ~ 20916840 (+)
G1672766 NA non-coding downstream 157505 20927949 ~ 20928209 (+)
G1671091 NA other upstream 528323 20227795 ~ 20228168 (+)
LOC110499153 LOC106589263 other upstream 1631255 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 2635324 18051611 ~ 18132470 (+)
G1670126 NA other upstream 2982789 17767481 ~ 17773702 (+)
G1670129 NA other upstream 2995679 17752294 ~ 17760812 (+)
G1672918 NA other downstream 318959 21089403 ~ 21089830 (+)
G1672973 NA other downstream 370081 21140525 ~ 21191078 (+)
G1673044 NA other downstream 525928 21296372 ~ 21296854 (+)
G1673063 NA other downstream 546354 21316798 ~ 21317412 (+)
G1673204 NA other downstream 615885 21386329 ~ 21389778 (+)

Expression


Co-expression Network