Gene
RNA
| Item | Value |
|---|---|
| gene id | G1672696 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 20811161 ~ 20811373 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tomoregulin-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1913776 | True | 213 | lncRNA | 0.50 | 1 | 20811161 | 20811373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499110 | LOC106589303 | coding | downstream | 3651 | 20766123 ~ 20807510 (-) |
| LOC110499116 | wnt3 | coding | downstream | 403812 | 20368996 ~ 20407349 (-) |
| LOC110499118 | LOC106589297 | coding | downstream | 502387 | 20297544 ~ 20308774 (-) |
| trnaa-ugc-145 | NA | coding | downstream | 644456 | 20166636 ~ 20166705 (-) |
| LOC110499121 | LOC106589293 | coding | downstream | 684574 | 20013073 ~ 20126587 (-) |
| LOC110499109 | LOC106589309 | coding | upstream | 50977 | 20862350 ~ 20872069 (-) |
| LOC118941997 | LOC106589179 | coding | upstream | 143826 | 20955199 ~ 20957806 (-) |
| LOC118942009 | NA | coding | upstream | 166850 | 20978223 ~ 20979539 (-) |
| LOC110499105 | LOC106589523 | coding | upstream | 380238 | 21191611 ~ 21214252 (-) |
| LOC110499589 | NA | coding | upstream | 408062 | 21219435 ~ 21221837 (-) |
| G1672618 | NA | non-coding | downstream | 37410 | 20671156 ~ 20773751 (-) |
| G1672636 | NA | non-coding | downstream | 73960 | 20713319 ~ 20737201 (-) |
| G1672588 | NA | non-coding | downstream | 141098 | 20620742 ~ 20670417 (-) |
| G1672578 | NA | non-coding | downstream | 213489 | 20597437 ~ 20597672 (-) |
| G1672566 | NA | non-coding | downstream | 236630 | 20574305 ~ 20574531 (-) |
| G1672743 | NA | non-coding | upstream | 64258 | 20875631 ~ 20875869 (-) |
| G1672750 | NA | non-coding | upstream | 68705 | 20880078 ~ 20880415 (-) |
| G1672760 | NA | non-coding | upstream | 85379 | 20896752 ~ 20896993 (-) |
| G1672764 | NA | non-coding | upstream | 101693 | 20913066 ~ 20913535 (-) |
| G1672767 | NA | non-coding | upstream | 138670 | 20950043 ~ 20950351 (-) |
| G1672649 | dhx8 | other | downstream | 81089 | 20729275 ~ 20730072 (-) |
| G1672381 | LOC106589294 | other | downstream | 559996 | 20249459 ~ 20251165 (-) |
| G1671895 | LOC107575789 | other | downstream | 1376120 | 19432139 ~ 19435041 (-) |
| G1671859 | LOC106589268 | other | downstream | 1404230 | 19326814 ~ 19406931 (-) |
| phf5a | LOC102780084 | other | upstream | 777656 | 21589006 ~ 21596518 (-) |
| G1673740 | LOC106589538 | other | upstream | 1024960 | 21836333 ~ 21844793 (-) |
| G1674299 | NA | other | upstream | 1519977 | 22331350 ~ 22331806 (-) |
| LOC118942052 | mkl2 | other | upstream | 1574950 | 22386323 ~ 22391573 (-) |
| LOC110499164 | litaf | other | upstream | 1580444 | 22391641 ~ 22395025 (-) |
