G1672765


Basic Information

Item Value
gene id G1672765
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 20915765 ~ 20916840 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1913850
accctttgttttgagactcaaaattgagctcaggtgcatcctgtttccattgatcatccttgagatgagtCCATCTGTTATAAATTCAAATTATTgtaaatgatttggaaaggtacatacctgtctatataaggtcccacagttgacagttcatgtcagagcaaaaaccaagccgtgaggtagaaggaattgtctgtagagctttgagacaggattgtgttgagcattgaaggtccccaagaagacagtggcctccatcattcttaaatggaagaagtttggaactaccaagactatttctagagctggccacccagccaaactgagcaatcgggggagaagggccttggtcagggaggtgaccaagaacccgatggtcaataTGAaggaactccagagttcctctgtggagatgggagaaccttccagaaggacaaccatctctgcagcactccaccaatcaggcctttatggtagtggctagatggaagccactcctcagtaaaaggcacatgacagcccgcttggattttTACAAAAGCTTTCtctgatcatgagaaacaagattctctggtctgatgaaaccaagaaagaactcttcggcctgaatgccaagcgtcacatctggaggaaacttgtCACCATTCCTGATGCATGGTGGtgaaagcatcatgctgtggggatgtttttcagggtcaggggctgggagactaggattgagggaaagatgaatggagcaaagtacagagtgatccttgatgaaaatctgctccagagcgctcaggacctcagactggggcaaaggttcaccttccaacaggacaaccaccctaagcacacagccaagataacgcaggagtggctttgggacaagtctctgaatgttcttgagtggcccagccagagcccggacttgaacctgaccgAACATCtttagagagacctgaaaatagctgtgcagcgacactcccatccaacctgacagagcttgagaggatctgcagagaagaatgggagaaactccccagatacaagtgtgccaagcttgtagcgtaaaatccaagaagactcaaggc

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1913850 True 1076 lncRNA 0.47 1 20915765 20916840

Neighbor

gene id symbol gene type direction distance location
LOC110499111 LOC106589301 coding upstream 151683 20735432 ~ 20764082 (+)
LOC110499112 LOC106589300 coding upstream 180426 20706399 ~ 20735339 (+)
LOC110499114 LOC105007436 coding upstream 227702 20654464 ~ 20688063 (+)
LOC118942050 NA coding upstream 271697 20493325 ~ 20644068 (+)
LOC110499115 LOC106589298 coding upstream 546489 20319484 ~ 20369276 (+)
LOC110499108 LOC106578253 coding downstream 85811 21002651 ~ 21040111 (+)
LOC110499107 LOC106578254 coding downstream 237695 21154535 ~ 21168654 (+)
trnal-uag-53 NA coding downstream 311683 21228523 ~ 21228604 (+)
LOC110499104 LOC106589524 coding downstream 317371 21234211 ~ 21277617 (+)
LOC110499103 LOC106589525 coding downstream 415454 21332294 ~ 21377525 (+)
G1672763 NA non-coding upstream 13476 20901930 ~ 20902289 (+)
G1672762 NA non-coding upstream 13971 20901332 ~ 20901794 (+)
G1672761 NA non-coding upstream 14525 20900773 ~ 20901240 (+)
G1671391 NA non-coding upstream 145321 20756491 ~ 20770444 (+)
G1671235 NA non-coding upstream 216600 20698167 ~ 20699165 (+)
G1672766 NA non-coding downstream 11109 20927949 ~ 20928209 (+)
G1672768 NA non-coding downstream 34638 20951478 ~ 20951687 (+)
G1672769 NA non-coding downstream 51851 20968691 ~ 20969374 (+)
G1672770 NA non-coding downstream 53929 20970769 ~ 20970970 (+)
G1672785 NA non-coding downstream 123329 21040169 ~ 21041867 (+)
G1671091 NA other upstream 687597 20227795 ~ 20228168 (+)
LOC110499153 LOC106589263 other upstream 1790529 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 2794598 18051611 ~ 18132470 (+)
G1670126 NA other upstream 3142063 17767481 ~ 17773702 (+)
G1670129 NA other upstream 3154953 17752294 ~ 17760812 (+)
G1672918 NA other downstream 172563 21089403 ~ 21089830 (+)
G1672973 NA other downstream 223685 21140525 ~ 21191078 (+)
G1673044 NA other downstream 379532 21296372 ~ 21296854 (+)
G1673063 NA other downstream 399958 21316798 ~ 21317412 (+)
G1673204 NA other downstream 469489 21386329 ~ 21389778 (+)

Expression


Co-expression Network