G1672869



Basic Information


Item Value
gene id G1672869
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 21052483 ~ 21052817 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1913959
gtgagtcccagaaagagggccaattatctacaaattctatcttttgggaggggcagaaaacagtttaaccagcgattgagttgtgagactctgctgtagagctcatcactccccctaactgggagggggccagagacaattactcgatgccgacacatctttctggctgatttacacgctgaagctatgttgcgcttggtgacctctgactgtttcatcctaacatcgttggtgccgacgtggataacaatatctctatactctccacactcgccagttttagctttagccagcaccatcttcagattagccttaacgttggtagccctgccccc

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1913959 True 335 lncRNA 0.49 1 21052483 21052817

Neighbor


gene id symbol gene type direction distance location
LOC118942009 NA coding downstream 72944 20978223 ~ 20979539 (-)
LOC118941997 LOC106589179 coding downstream 94677 20955199 ~ 20957806 (-)
LOC110499109 LOC106589309 coding downstream 180414 20862350 ~ 20872069 (-)
LOC110499110 LOC106589303 coding downstream 244973 20766123 ~ 20807510 (-)
LOC110499116 wnt3 coding downstream 645134 20368996 ~ 20407349 (-)
LOC110499105 LOC106589523 coding upstream 138794 21191611 ~ 21214252 (-)
LOC110499589 NA coding upstream 166618 21219435 ~ 21221837 (-)
LOC110499102 LOC106589526 coding upstream 333496 21386313 ~ 21401314 (-)
LOC110498762 LOC106589530 coding upstream 391974 21444791 ~ 21496435 (-)
phf5a LOC102780084 coding upstream 536189 21589006 ~ 21596518 (-)
G1672868 NA non-coding downstream 973 21051310 ~ 21051510 (-)
G1672864 NA non-coding downstream 4108 21048173 ~ 21048375 (-)
G1672855 NA non-coding downstream 10631 21040175 ~ 21041852 (-)
G1672767 NA non-coding downstream 102132 20950043 ~ 20950351 (-)
G1672764 NA non-coding downstream 138948 20913066 ~ 20913535 (-)
G1672879 NA non-coding upstream 4195 21057012 ~ 21057313 (-)
G1672880 NA non-coding upstream 4550 21057367 ~ 21057575 (-)
G1672900 NA non-coding upstream 18207 21071024 ~ 21077133 (-)
G1672969 LOC100136012 non-coding upstream 81872 21134689 ~ 21134929 (-)
G1673148 NA non-coding upstream 242189 21295006 ~ 21295318 (-)
G1672649 dhx8 other downstream 322411 20729275 ~ 20730072 (-)
G1672588 NA other downstream 382066 20620742 ~ 20670417 (-)
G1672381 LOC106589294 other downstream 801318 20249459 ~ 20251165 (-)
G1671895 LOC107575789 other downstream 1617442 19432139 ~ 19435041 (-)
G1671859 LOC106589268 other downstream 1645552 19326814 ~ 19406931 (-)
G1673740 LOC106589538 other upstream 783516 21836333 ~ 21844793 (-)
G1674299 NA other upstream 1278533 22331350 ~ 22331806 (-)
LOC118942052 mkl2 other upstream 1333506 22386323 ~ 22391573 (-)
LOC110499164 litaf other upstream 1339000 22391641 ~ 22395025 (-)

Expression



Co-expression Network