Gene
RNA
| Item | Value |
|---|---|
| gene id | G1672881 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 21057642 ~ 21057897 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1913971 | True | 256 | lncRNA | 0.47 | 1 | 21057642 | 21057897 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499108 | LOC106578253 | coding | upstream | 17531 | 21002651 ~ 21040111 (+) |
| LOC110499111 | LOC106589301 | coding | upstream | 293560 | 20735432 ~ 20764082 (+) |
| LOC110499112 | LOC106589300 | coding | upstream | 322303 | 20706399 ~ 20735339 (+) |
| LOC110499114 | LOC105007436 | coding | upstream | 369579 | 20654464 ~ 20688063 (+) |
| LOC118942050 | NA | coding | upstream | 413574 | 20493325 ~ 20644068 (+) |
| LOC110499107 | LOC106578254 | coding | downstream | 96638 | 21154535 ~ 21168654 (+) |
| trnal-uag-53 | NA | coding | downstream | 170626 | 21228523 ~ 21228604 (+) |
| LOC110499104 | LOC106589524 | coding | downstream | 176314 | 21234211 ~ 21277617 (+) |
| LOC110499103 | LOC106589525 | coding | downstream | 274397 | 21332294 ~ 21377525 (+) |
| LOC110499101 | ku70 | coding | downstream | 347625 | 21405522 ~ 21420610 (+) |
| G1672877 | NA | non-coding | upstream | 1153 | 21055801 ~ 21056489 (+) |
| G1672856 | NA | non-coding | upstream | 13653 | 21043779 ~ 21043989 (+) |
| G1672785 | NA | non-coding | upstream | 15775 | 21040169 ~ 21041867 (+) |
| G1672770 | NA | non-coding | upstream | 86672 | 20970769 ~ 20970970 (+) |
| G1672769 | NA | non-coding | upstream | 88268 | 20968691 ~ 20969374 (+) |
| G1672882 | NA | non-coding | downstream | 1518 | 21059415 ~ 21059760 (+) |
| G1672888 | NA | non-coding | downstream | 4308 | 21062205 ~ 21062661 (+) |
| G1672915 | NA | non-coding | downstream | 30438 | 21088335 ~ 21088592 (+) |
| G1672917 | NA | non-coding | downstream | 30886 | 21088783 ~ 21088984 (+) |
| G1672919 | NA | non-coding | downstream | 32236 | 21090133 ~ 21090349 (+) |
| G1671091 | NA | other | upstream | 829474 | 20227795 ~ 20228168 (+) |
| LOC110499153 | LOC106589263 | other | upstream | 1932406 | 19094882 ~ 19201695 (+) |
| G1670209 | LOC105007702 | other | upstream | 2936475 | 18051611 ~ 18132470 (+) |
| G1670126 | NA | other | upstream | 3283940 | 17767481 ~ 17773702 (+) |
| G1670129 | NA | other | upstream | 3296830 | 17752294 ~ 17760812 (+) |
| G1672918 | NA | other | downstream | 31506 | 21089403 ~ 21089830 (+) |
| G1672973 | NA | other | downstream | 82628 | 21140525 ~ 21191078 (+) |
| G1673044 | NA | other | downstream | 238475 | 21296372 ~ 21296854 (+) |
| G1673063 | NA | other | downstream | 258901 | 21316798 ~ 21317412 (+) |
| G1673204 | NA | other | downstream | 328432 | 21386329 ~ 21389778 (+) |
