G1672882


Basic Information

Item Value
gene id G1672882
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 21059415 ~ 21059760 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1913972
aaagacctgAAGAATAAACCCTCTTCCTCACatctgcccatgtcccttaatgttgatgatgtggttgttactgacatgaagcacatggctgagctctttaatcaccacttcttTAAGTCAGGagtcctatttgactcagccatgcatccttgcccgtccaacatttcctcatctcccaccccttatAATGCGACTAGCCCATCGCAAGTCCTACTGATTGaagcttatttataaaaccctcttaggcctcactcccccctatctgagatatctacagcagccctcatcctccacagaCAAGAcacgttctgccagtcacattctgttaaaggtccccaaagcacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1913972 True 346 lncRNA 0.47 1 21059415 21059760

Neighbor

gene id symbol gene type direction distance location
LOC110499108 LOC106578253 coding upstream 19304 21002651 ~ 21040111 (+)
LOC110499111 LOC106589301 coding upstream 295333 20735432 ~ 20764082 (+)
LOC110499112 LOC106589300 coding upstream 324076 20706399 ~ 20735339 (+)
LOC110499114 LOC105007436 coding upstream 371352 20654464 ~ 20688063 (+)
LOC118942050 NA coding upstream 415347 20493325 ~ 20644068 (+)
LOC110499107 LOC106578254 coding downstream 94775 21154535 ~ 21168654 (+)
trnal-uag-53 NA coding downstream 168763 21228523 ~ 21228604 (+)
LOC110499104 LOC106589524 coding downstream 174451 21234211 ~ 21277617 (+)
LOC110499103 LOC106589525 coding downstream 272534 21332294 ~ 21377525 (+)
LOC110499101 ku70 coding downstream 345762 21405522 ~ 21420610 (+)
G1672881 NA non-coding upstream 1518 21057642 ~ 21057897 (+)
G1672877 NA non-coding upstream 2926 21055801 ~ 21056489 (+)
G1672856 NA non-coding upstream 15426 21043779 ~ 21043989 (+)
G1672785 NA non-coding upstream 17548 21040169 ~ 21041867 (+)
G1672770 NA non-coding upstream 88445 20970769 ~ 20970970 (+)
G1672888 NA non-coding downstream 2445 21062205 ~ 21062661 (+)
G1672915 NA non-coding downstream 28575 21088335 ~ 21088592 (+)
G1672917 NA non-coding downstream 29023 21088783 ~ 21088984 (+)
G1672919 NA non-coding downstream 30373 21090133 ~ 21090349 (+)
G1672922 NA non-coding downstream 33966 21093726 ~ 21097480 (+)
G1671091 NA other upstream 831247 20227795 ~ 20228168 (+)
LOC110499153 LOC106589263 other upstream 1934179 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 2938248 18051611 ~ 18132470 (+)
G1670126 NA other upstream 3285713 17767481 ~ 17773702 (+)
G1670129 NA other upstream 3298603 17752294 ~ 17760812 (+)
G1672918 NA other downstream 29643 21089403 ~ 21089830 (+)
G1672973 NA other downstream 80765 21140525 ~ 21191078 (+)
G1673044 NA other downstream 236612 21296372 ~ 21296854 (+)
G1673063 NA other downstream 257038 21316798 ~ 21317412 (+)
G1673204 NA other downstream 326569 21386329 ~ 21389778 (+)

Expression


Co-expression Network