G1672915


Basic Information

Item Value
gene id G1672915
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 21088335 ~ 21088592 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1914006
tactggtttctctgtgccaggGGTAATGAAGGGTCCCACGATAGCACTGTCTGCGTATGCAGATGACGTGATAGTTTTTATTACAGGGGGTGAGGATGTTAAGGTTCTCTCAAATGCTTTAAAGGTGTATGAGGGGGCCTCCTCAGCTAGAGTCAATTGGGGAAAGAGTGAAGAGATGTGGGCAGGTCagcttcagacggggtccgctccacggttaccaggggggcttcagtggGGCAGAGATGGGATGAAGACTTT

Function

NR:

description
pol-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1914006 True 258 lncRNA 0.52 1 21088335 21088592

Neighbor

gene id symbol gene type direction distance location
LOC110499108 LOC106578253 coding upstream 48224 21002651 ~ 21040111 (+)
LOC110499111 LOC106589301 coding upstream 324253 20735432 ~ 20764082 (+)
LOC110499112 LOC106589300 coding upstream 352996 20706399 ~ 20735339 (+)
LOC110499114 LOC105007436 coding upstream 400272 20654464 ~ 20688063 (+)
LOC118942050 NA coding upstream 444267 20493325 ~ 20644068 (+)
LOC110499107 LOC106578254 coding downstream 65943 21154535 ~ 21168654 (+)
trnal-uag-53 NA coding downstream 139931 21228523 ~ 21228604 (+)
LOC110499104 LOC106589524 coding downstream 145619 21234211 ~ 21277617 (+)
LOC110499103 LOC106589525 coding downstream 243702 21332294 ~ 21377525 (+)
LOC110499101 ku70 coding downstream 316930 21405522 ~ 21420610 (+)
G1672888 NA non-coding upstream 25674 21062205 ~ 21062661 (+)
G1672882 NA non-coding upstream 28575 21059415 ~ 21059760 (+)
G1672881 NA non-coding upstream 30438 21057642 ~ 21057897 (+)
G1672877 NA non-coding upstream 31846 21055801 ~ 21056489 (+)
G1672856 NA non-coding upstream 44346 21043779 ~ 21043989 (+)
G1672917 NA non-coding downstream 191 21088783 ~ 21088984 (+)
G1672919 NA non-coding downstream 1541 21090133 ~ 21090349 (+)
G1672922 NA non-coding downstream 5134 21093726 ~ 21097480 (+)
G1672968 NA non-coding downstream 46135 21134727 ~ 21134927 (+)
G1672983 NA non-coding downstream 103045 21191637 ~ 21193964 (+)
G1671091 NA other upstream 860167 20227795 ~ 20228168 (+)
LOC110499153 LOC106589263 other upstream 1963099 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 2967168 18051611 ~ 18132470 (+)
G1670126 NA other upstream 3314633 17767481 ~ 17773702 (+)
G1670129 NA other upstream 3327523 17752294 ~ 17760812 (+)
G1672918 NA other downstream 811 21089403 ~ 21089830 (+)
G1672973 NA other downstream 51933 21140525 ~ 21191078 (+)
G1673044 NA other downstream 207780 21296372 ~ 21296854 (+)
G1673063 NA other downstream 228206 21316798 ~ 21317412 (+)
G1673204 NA other downstream 297737 21386329 ~ 21389778 (+)

Expression


Co-expression Network