G1672917


Basic Information

Item Value
gene id G1672917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 21088783 ~ 21088984 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1914008
CAGTATCTTCAGAGGACCCTTGTCaatgtcttctggtctggacAACACTGGATTAAAGCTGCAGCCCTGTAACTGCCACTGCACGAGGGTGGACAAGGCCTGGTGGACATTTCCTCTAGAATCATGGCTTTCTGGCTCCAAGCAGCCCAGAGATTGTTGTACAGAGACGGTTCTAGCTGGGTCGAAACAGCCTACATATTGA

Function

NR:

description
PREDICTED: collagen alpha-1(XVI) chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1914008 True 202 lncRNA 0.50 1 21088783 21088984

Neighbor

gene id symbol gene type direction distance location
LOC110499108 LOC106578253 coding upstream 48672 21002651 ~ 21040111 (+)
LOC110499111 LOC106589301 coding upstream 324701 20735432 ~ 20764082 (+)
LOC110499112 LOC106589300 coding upstream 353444 20706399 ~ 20735339 (+)
LOC110499114 LOC105007436 coding upstream 400720 20654464 ~ 20688063 (+)
LOC118942050 NA coding upstream 444715 20493325 ~ 20644068 (+)
LOC110499107 LOC106578254 coding downstream 65551 21154535 ~ 21168654 (+)
trnal-uag-53 NA coding downstream 139539 21228523 ~ 21228604 (+)
LOC110499104 LOC106589524 coding downstream 145227 21234211 ~ 21277617 (+)
LOC110499103 LOC106589525 coding downstream 243310 21332294 ~ 21377525 (+)
LOC110499101 ku70 coding downstream 316538 21405522 ~ 21420610 (+)
G1672915 NA non-coding upstream 191 21088335 ~ 21088592 (+)
G1672888 NA non-coding upstream 26122 21062205 ~ 21062661 (+)
G1672882 NA non-coding upstream 29023 21059415 ~ 21059760 (+)
G1672881 NA non-coding upstream 30886 21057642 ~ 21057897 (+)
G1672877 NA non-coding upstream 32294 21055801 ~ 21056489 (+)
G1672919 NA non-coding downstream 1149 21090133 ~ 21090349 (+)
G1672922 NA non-coding downstream 4742 21093726 ~ 21097480 (+)
G1672968 NA non-coding downstream 45743 21134727 ~ 21134927 (+)
G1672983 NA non-coding downstream 102653 21191637 ~ 21193964 (+)
G1673011 NA non-coding downstream 123418 21212402 ~ 21213348 (+)
G1671091 NA other upstream 860615 20227795 ~ 20228168 (+)
LOC110499153 LOC106589263 other upstream 1963547 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 2967616 18051611 ~ 18132470 (+)
G1670126 NA other upstream 3315081 17767481 ~ 17773702 (+)
G1670129 NA other upstream 3327971 17752294 ~ 17760812 (+)
G1672918 NA other downstream 419 21089403 ~ 21089830 (+)
G1672973 NA other downstream 51541 21140525 ~ 21191078 (+)
G1673044 NA other downstream 207388 21296372 ~ 21296854 (+)
G1673063 NA other downstream 227814 21316798 ~ 21317412 (+)
G1673204 NA other downstream 297345 21386329 ~ 21389778 (+)

Expression


Co-expression Network