Gene
RNA
| Item | Value |
|---|---|
| gene id | G1672922 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 21093726 ~ 21097480 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1914013 | True | 215 | lncRNA | 0.33 | 2 | 21093726 | 21097480 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499108 | LOC106578253 | coding | upstream | 53615 | 21002651 ~ 21040111 (+) |
| LOC110499111 | LOC106589301 | coding | upstream | 329644 | 20735432 ~ 20764082 (+) |
| LOC110499112 | LOC106589300 | coding | upstream | 358387 | 20706399 ~ 20735339 (+) |
| LOC110499114 | LOC105007436 | coding | upstream | 405663 | 20654464 ~ 20688063 (+) |
| LOC118942050 | NA | coding | upstream | 449658 | 20493325 ~ 20644068 (+) |
| LOC110499107 | LOC106578254 | coding | downstream | 57055 | 21154535 ~ 21168654 (+) |
| trnal-uag-53 | NA | coding | downstream | 131043 | 21228523 ~ 21228604 (+) |
| LOC110499104 | LOC106589524 | coding | downstream | 136731 | 21234211 ~ 21277617 (+) |
| LOC110499103 | LOC106589525 | coding | downstream | 234814 | 21332294 ~ 21377525 (+) |
| LOC110499101 | ku70 | coding | downstream | 308042 | 21405522 ~ 21420610 (+) |
| G1672919 | NA | non-coding | upstream | 3377 | 21090133 ~ 21090349 (+) |
| G1672917 | NA | non-coding | upstream | 4742 | 21088783 ~ 21088984 (+) |
| G1672915 | NA | non-coding | upstream | 5134 | 21088335 ~ 21088592 (+) |
| G1672888 | NA | non-coding | upstream | 31065 | 21062205 ~ 21062661 (+) |
| G1672882 | NA | non-coding | upstream | 33966 | 21059415 ~ 21059760 (+) |
| G1672968 | NA | non-coding | downstream | 37247 | 21134727 ~ 21134927 (+) |
| G1672983 | NA | non-coding | downstream | 94157 | 21191637 ~ 21193964 (+) |
| G1673011 | NA | non-coding | downstream | 114922 | 21212402 ~ 21213348 (+) |
| G1673036 | NA | non-coding | downstream | 187300 | 21284780 ~ 21284990 (+) |
| G1673057 | NA | non-coding | downstream | 214262 | 21311742 ~ 21312101 (+) |
| G1672918 | NA | other | upstream | 3896 | 21089403 ~ 21089830 (+) |
| G1671091 | NA | other | upstream | 865558 | 20227795 ~ 20228168 (+) |
| LOC110499153 | LOC106589263 | other | upstream | 1968490 | 19094882 ~ 19201695 (+) |
| G1670209 | LOC105007702 | other | upstream | 2972559 | 18051611 ~ 18132470 (+) |
| G1670126 | NA | other | upstream | 3320024 | 17767481 ~ 17773702 (+) |
| G1672973 | NA | other | downstream | 43045 | 21140525 ~ 21191078 (+) |
| G1673044 | NA | other | downstream | 198892 | 21296372 ~ 21296854 (+) |
| G1673063 | NA | other | downstream | 219318 | 21316798 ~ 21317412 (+) |
| G1673204 | NA | other | downstream | 288849 | 21386329 ~ 21389778 (+) |
| LOC110499100 | LOC106589528 | other | downstream | 326037 | 21422168 ~ 21437402 (+) |
