G1672968


Basic Information

Item Value
gene id G1672968
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 21134727 ~ 21134927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1914061
gtgagaaggcaacaactgttggcgcaattattagaaaatggaagaagttcaagaagacggtcaatcaccctcggtctggggctccatgcaagatctcacctcgtggggcatcaatgatcatgaggaaggtgagggatcagctcagaactacatggcaggacctggtcaatgacctgaagagagctgggaccacagtctcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1914061 True 201 lncRNA 0.50 1 21134727 21134927

Neighbor

gene id symbol gene type direction distance location
LOC110499108 LOC106578253 coding upstream 94616 21002651 ~ 21040111 (+)
LOC110499111 LOC106589301 coding upstream 370645 20735432 ~ 20764082 (+)
LOC110499112 LOC106589300 coding upstream 399388 20706399 ~ 20735339 (+)
LOC110499114 LOC105007436 coding upstream 446664 20654464 ~ 20688063 (+)
LOC118942050 NA coding upstream 490659 20493325 ~ 20644068 (+)
LOC110499107 LOC106578254 coding downstream 19608 21154535 ~ 21168654 (+)
trnal-uag-53 NA coding downstream 93596 21228523 ~ 21228604 (+)
LOC110499104 LOC106589524 coding downstream 99284 21234211 ~ 21277617 (+)
LOC110499103 LOC106589525 coding downstream 197367 21332294 ~ 21377525 (+)
LOC110499101 ku70 coding downstream 270595 21405522 ~ 21420610 (+)
G1672922 NA non-coding upstream 37247 21093726 ~ 21097480 (+)
G1672919 NA non-coding upstream 44378 21090133 ~ 21090349 (+)
G1672917 NA non-coding upstream 45743 21088783 ~ 21088984 (+)
G1672915 NA non-coding upstream 46135 21088335 ~ 21088592 (+)
G1672888 NA non-coding upstream 72066 21062205 ~ 21062661 (+)
G1672983 NA non-coding downstream 56710 21191637 ~ 21193964 (+)
G1673011 NA non-coding downstream 77475 21212402 ~ 21213348 (+)
G1673036 NA non-coding downstream 149853 21284780 ~ 21284990 (+)
G1673057 NA non-coding downstream 176815 21311742 ~ 21312101 (+)
G1673183 NA non-coding downstream 219636 21354563 ~ 21354777 (+)
G1672918 NA other upstream 44897 21089403 ~ 21089830 (+)
G1671091 NA other upstream 906559 20227795 ~ 20228168 (+)
LOC110499153 LOC106589263 other upstream 2009491 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 3013560 18051611 ~ 18132470 (+)
G1670126 NA other upstream 3361025 17767481 ~ 17773702 (+)
G1672973 NA other downstream 5598 21140525 ~ 21191078 (+)
G1673044 NA other downstream 161445 21296372 ~ 21296854 (+)
G1673063 NA other downstream 181871 21316798 ~ 21317412 (+)
G1673204 NA other downstream 251402 21386329 ~ 21389778 (+)
LOC110499100 LOC106589528 other downstream 288590 21422168 ~ 21437402 (+)

Expression


Co-expression Network