G1673057


Basic Information

Item Value
gene id G1673057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 21311742 ~ 21312101 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1914158
acttgaccccaaaaaggctgagttgcaaagaaaaggccatatctcagactgtccAATAAAAAGAGAAGATTAAGaggggcaaaagaacacagacactgtacaggggaactctgcctagaaggccagcatctcggaatcgcctcttcactgtcgacgttgagactggtgttttgcgggtactatttaatgaagttgccagttgaggacttgtgaggcgtctgtttctcaaactagacactaatgtacttgtcctcttgctcagttgtgcaccggggcctcccactctttcaaactggttagagccagtttgcgctgttctgtgaaggtagtagtacacagcgtttctgatcaatttgatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1914158 True 360 lncRNA 0.46 1 21311742 21312101

Neighbor

gene id symbol gene type direction distance location
LOC110499104 LOC106589524 coding upstream 34125 21234211 ~ 21277617 (+)
trnal-uag-53 NA coding upstream 83138 21228523 ~ 21228604 (+)
LOC110499107 LOC106578254 coding upstream 143088 21154535 ~ 21168654 (+)
LOC110499108 LOC106578253 coding upstream 271631 21002651 ~ 21040111 (+)
LOC110499111 LOC106589301 coding upstream 547660 20735432 ~ 20764082 (+)
LOC110499103 LOC106589525 coding downstream 20193 21332294 ~ 21377525 (+)
LOC110499101 ku70 coding downstream 93421 21405522 ~ 21420610 (+)
LOC110499100 LOC106589528 coding downstream 110067 21422168 ~ 21437402 (+)
LOC110499099 LOC106589529 coding downstream 125434 21437535 ~ 21442026 (+)
LOC118941998 NA coding downstream 184293 21496394 ~ 21517265 (+)
G1673036 NA non-coding upstream 26752 21284780 ~ 21284990 (+)
G1673011 NA non-coding upstream 98394 21212402 ~ 21213348 (+)
G1672983 NA non-coding upstream 117778 21191637 ~ 21193964 (+)
G1672968 NA non-coding upstream 176815 21134727 ~ 21134927 (+)
G1672922 NA non-coding upstream 214262 21093726 ~ 21097480 (+)
G1673183 NA non-coding downstream 42462 21354563 ~ 21354777 (+)
G1673166 NA non-coding downstream 70638 21382739 ~ 21383609 (+)
G1673251 NA non-coding downstream 166531 21478632 ~ 21536718 (+)
G1673333 NA non-coding downstream 309350 21621451 ~ 21621681 (+)
G1673044 NA other upstream 14888 21296372 ~ 21296854 (+)
G1672973 NA other upstream 120664 21140525 ~ 21191078 (+)
G1672918 NA other upstream 221912 21089403 ~ 21089830 (+)
G1671091 NA other upstream 1083574 20227795 ~ 20228168 (+)
LOC110499153 LOC106589263 other upstream 2186506 19094882 ~ 19201695 (+)
G1673063 NA other downstream 4697 21316798 ~ 21317412 (+)
G1673204 NA other downstream 74228 21386329 ~ 21389778 (+)
G1673231 LOC106589530 other downstream 132782 21444883 ~ 21450346 (+)
tnrc6b LOC106589538 other downstream 501144 21806703 ~ 21848442 (+)

Expression


Co-expression Network