G1673251


Basic Information

Item Value
gene id G1673251
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 21478632 ~ 21536718 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1914393
cgagcttaatgatgagcttggagagtactatggtgttgaatgttgagctatagtcaataaacataattcttacataggtattccgcTTGTCCAGATGGAACCAAGGCATAACATGtagcgtttacatttttgttcagtgtattgaCTATTTGTCTAGCAACTACATTTTCCAATGTTCTTACAgtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatggcaagatggatggagccaaatacaggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1914393 True 280 lncRNA 0.41 2 21478632 21536718

Neighbor

gene id symbol gene type direction distance location
LOC110499099 LOC106589529 coding upstream 36606 21437535 ~ 21442026 (+)
LOC110499100 LOC106589528 coding upstream 41230 21422168 ~ 21437402 (+)
LOC110499101 ku70 coding upstream 58022 21405522 ~ 21420610 (+)
LOC110499103 LOC106589525 coding upstream 101107 21332294 ~ 21377525 (+)
LOC110499104 LOC106589524 coding upstream 201015 21234211 ~ 21277617 (+)
LOC110499096 LOC106589531 coding downstream 36317 21573035 ~ 21586408 (+)
LOC110499095 LOC106589533 coding downstream 58163 21594881 ~ 21614231 (+)
csdc2a LOC106589535 coding downstream 91187 21627905 ~ 21636035 (+)
si:ch73-139e5.4 LOC106589536 coding downstream 120217 21656935 ~ 21685353 (+)
cby1 cby1 coding downstream 173793 21710511 ~ 21721556 (+)
G1673166 NA non-coding upstream 95023 21382739 ~ 21383609 (+)
G1673183 NA non-coding upstream 123855 21354563 ~ 21354777 (+)
G1673057 NA non-coding upstream 166531 21311742 ~ 21312101 (+)
G1673036 NA non-coding upstream 193642 21284780 ~ 21284990 (+)
G1673333 NA non-coding downstream 84733 21621451 ~ 21621681 (+)
G1673334 NA non-coding downstream 86490 21623208 ~ 21623435 (+)
G1673368 NA non-coding downstream 139307 21676025 ~ 21681986 (+)
G1673369 NA non-coding downstream 139596 21676314 ~ 21682360 (+)
G1673341 kcd17 non-coding downstream 164353 21701071 ~ 21701804 (+)
G1673231 LOC106589530 other upstream 28286 21444883 ~ 21450346 (+)
G1673204 NA other upstream 88854 21386329 ~ 21389778 (+)
G1673063 NA other upstream 161220 21316798 ~ 21317412 (+)
G1673044 NA other upstream 181778 21296372 ~ 21296854 (+)
tnrc6b LOC106589538 other downstream 276527 21806703 ~ 21848442 (+)
LOC110513322 rsl1d1 other downstream 399924 21936590 ~ 21959627 (+)
LOC110499192 LOC106589579 other downstream 1720086 23252800 ~ 23269058 (+)
faap100 faap100 other downstream 2043312 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 3545946 25082664 ~ 25083277 (+)

Expression


Co-expression Network