Gene
RNA
| Item | Value |
|---|---|
| gene id | G1673333 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 21621451 ~ 21621681 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1914493 | True | 231 | lncRNA | 0.50 | 1 | 21621451 | 21621681 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499095 | LOC106589533 | coding | upstream | 7220 | 21594881 ~ 21614231 (+) |
| LOC110499096 | LOC106589531 | coding | upstream | 35043 | 21573035 ~ 21586408 (+) |
| LOC110499098 | NA | coding | upstream | 58878 | 21518345 ~ 21562573 (+) |
| LOC118941998 | NA | coding | upstream | 104186 | 21496394 ~ 21517265 (+) |
| LOC110499099 | LOC106589529 | coding | upstream | 179425 | 21437535 ~ 21442026 (+) |
| csdc2a | LOC106589535 | coding | downstream | 6224 | 21627905 ~ 21636035 (+) |
| si:ch73-139e5.4 | LOC106589536 | coding | downstream | 35254 | 21656935 ~ 21685353 (+) |
| cby1 | cby1 | coding | downstream | 88830 | 21710511 ~ 21721556 (+) |
| LOC110499089 | LOC106589537 | coding | downstream | 103867 | 21725548 ~ 21729360 (+) |
| sh3bp1 | LOC106589540 | coding | downstream | 118279 | 21739960 ~ 21755576 (+) |
| G1673251 | NA | non-coding | upstream | 84733 | 21478632 ~ 21536718 (+) |
| LOC110499100 | LOC106589528 | non-coding | upstream | 197996 | 21422168 ~ 21437402 (+) |
| G1673166 | NA | non-coding | upstream | 237842 | 21382739 ~ 21383609 (+) |
| G1673183 | NA | non-coding | upstream | 266674 | 21354563 ~ 21354777 (+) |
| G1673057 | NA | non-coding | upstream | 309350 | 21311742 ~ 21312101 (+) |
| G1673334 | NA | non-coding | downstream | 1527 | 21623208 ~ 21623435 (+) |
| G1673368 | NA | non-coding | downstream | 54344 | 21676025 ~ 21681986 (+) |
| G1673369 | NA | non-coding | downstream | 54633 | 21676314 ~ 21682360 (+) |
| G1673341 | kcd17 | non-coding | downstream | 79390 | 21701071 ~ 21701804 (+) |
| G1673434 | NA | non-coding | downstream | 182875 | 21804556 ~ 21804932 (+) |
| G1673231 | LOC106589530 | other | upstream | 171105 | 21444883 ~ 21450346 (+) |
| G1673204 | NA | other | upstream | 231673 | 21386329 ~ 21389778 (+) |
| G1673063 | NA | other | upstream | 304039 | 21316798 ~ 21317412 (+) |
| G1673044 | NA | other | upstream | 324597 | 21296372 ~ 21296854 (+) |
| tnrc6b | LOC106589538 | other | downstream | 191564 | 21806703 ~ 21848442 (+) |
| LOC110513322 | rsl1d1 | other | downstream | 314961 | 21936590 ~ 21959627 (+) |
| LOC110499192 | LOC106589579 | other | downstream | 1635123 | 23252800 ~ 23269058 (+) |
| faap100 | faap100 | other | downstream | 1958349 | 23576429 ~ 23582556 (+) |
| G1677419 | LOC100194703 | other | downstream | 3460983 | 25082664 ~ 25083277 (+) |
