Gene
RNA
| Item | Value |
|---|---|
| gene id | G1673740 |
| gene name | LOC106589538 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 21836333 ~ 21844793 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: trinucleotide repeat-containing gene 6B protein-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1914957 | True | 416 | TUCP | 0.62 | 3 | 21836333 | 21844793 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499087 | LOC106589541 | coding | downstream | 50129 | 21684993 ~ 21786204 (-) |
| trnar-ccu-54 | NA | coding | downstream | 126141 | 21710120 ~ 21710192 (-) |
| LOC110499092 | kcd17 | coding | downstream | 134570 | 21685612 ~ 21701763 (-) |
| phf5a | LOC102780084 | coding | downstream | 239815 | 21589006 ~ 21596518 (-) |
| LOC110498762 | LOC106589530 | coding | downstream | 339898 | 21444791 ~ 21496435 (-) |
| maff | LOC106589545 | coding | upstream | 51912 | 21896705 ~ 21902217 (-) |
| shisa9a | shisa9 | coding | upstream | 360199 | 22204992 ~ 22252446 (-) |
| LOC118942052 | mkl2 | coding | upstream | 542289 | 22386323 ~ 22391573 (-) |
| LOC110499164 | litaf | coding | upstream | 546848 | 22391641 ~ 22395025 (-) |
| ubald1a | LOC106589553 | coding | upstream | 569821 | 22414614 ~ 22446035 (-) |
| G1673719 | LOC106589538 | non-coding | downstream | 22306 | 21813250 ~ 21814027 (-) |
| G1673650 | NA | non-coding | downstream | 106983 | 21726684 ~ 21729350 (-) |
| G1673621 | NA | non-coding | downstream | 200305 | 21634804 ~ 21636028 (-) |
| G1673745 | NA | non-coding | upstream | 1158 | 21845951 ~ 21848428 (-) |
| G1673750 | NA | non-coding | upstream | 8522 | 21853315 ~ 21853535 (-) |
| G1673752 | NA | non-coding | upstream | 9752 | 21854545 ~ 21855010 (-) |
| G1673758 | NA | non-coding | upstream | 14510 | 21859303 ~ 21859661 (-) |
| G1673762 | NA | non-coding | upstream | 17716 | 21862509 ~ 21862711 (-) |
| G1672649 | dhx8 | other | downstream | 1106261 | 20729275 ~ 20730072 (-) |
| G1672588 | NA | other | downstream | 1165916 | 20620742 ~ 20670417 (-) |
| G1672381 | LOC106589294 | other | downstream | 1585168 | 20249459 ~ 20251165 (-) |
| G1671895 | LOC107575789 | other | downstream | 2401292 | 19432139 ~ 19435041 (-) |
| G1674299 | NA | other | upstream | 486557 | 22331350 ~ 22331806 (-) |
| G1674481 | LOC106613263 | other | upstream | 552116 | 22396909 ~ 22397223 (-) |
| G1674592 | NA | other | upstream | 746777 | 22591570 ~ 22601548 (-) |
