Gene
RNA
| Item | Value |
|---|---|
| gene id | G1673765 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 21863587 ~ 21863816 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1914984 | True | 230 | lncRNA | 0.43 | 1 | 21863587 | 21863816 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tnrc6b | LOC106589538 | coding | upstream | 15145 | 21806703 ~ 21848442 (+) |
| sh3bp1 | LOC106589540 | coding | upstream | 108011 | 21739960 ~ 21755576 (+) |
| LOC110499089 | LOC106589537 | coding | upstream | 134227 | 21725548 ~ 21729360 (+) |
| cby1 | cby1 | coding | upstream | 142031 | 21710511 ~ 21721556 (+) |
| si:ch73-139e5.4 | LOC106589536 | coding | upstream | 178234 | 21656935 ~ 21685353 (+) |
| LOC110499080 | LOC106609470 | coding | downstream | 4018 | 21867834 ~ 21876459 (+) |
| tmem184ba | LOC106609488 | coding | downstream | 13059 | 21876875 ~ 21894557 (+) |
| tomm22 | LOC106589546 | coding | downstream | 38789 | 21902605 ~ 21907221 (+) |
| dmc1 | LOC106609504 | coding | downstream | 43801 | 21907617 ~ 21919609 (+) |
| gspt1 | gspt1 | coding | downstream | 61009 | 21924825 ~ 21936465 (+) |
| G1673759 | NA | non-coding | upstream | 3431 | 21859936 ~ 21860156 (+) |
| G1673751 | NA | non-coding | upstream | 9657 | 21853684 ~ 21853930 (+) |
| G1673749 | NA | non-coding | upstream | 10297 | 21853080 ~ 21853290 (+) |
| G1673748 | NA | non-coding | upstream | 10567 | 21852812 ~ 21853020 (+) |
| G1673766 | NA | non-coding | downstream | 667 | 21864483 ~ 21864682 (+) |
| G1673768 | NA | non-coding | downstream | 2070 | 21865886 ~ 21866095 (+) |
| G1673775 | LOC106589545 | non-coding | downstream | 32949 | 21896765 ~ 21900182 (+) |
| G1673778 | NA | non-coding | downstream | 38051 | 21901867 ~ 21902080 (+) |
| G1673797 | NA | non-coding | downstream | 80212 | 21944028 ~ 21950021 (+) |
| G1673231 | LOC106589530 | other | upstream | 413241 | 21444883 ~ 21450346 (+) |
| LOC110499100 | LOC106589528 | other | upstream | 426206 | 21422168 ~ 21437402 (+) |
| G1673204 | NA | other | upstream | 473809 | 21386329 ~ 21389778 (+) |
| G1673063 | NA | other | upstream | 546175 | 21316798 ~ 21317412 (+) |
| LOC110513322 | rsl1d1 | other | downstream | 72826 | 21936590 ~ 21959627 (+) |
| LOC110499192 | LOC106589579 | other | downstream | 1392988 | 23252800 ~ 23269058 (+) |
| faap100 | faap100 | other | downstream | 1716214 | 23576429 ~ 23582556 (+) |
| G1677419 | LOC100194703 | other | downstream | 3218848 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 3772875 | 25636691 ~ 25641614 (+) |
