G1673797



Basic Information


Item Value
gene id G1673797
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 21944028 ~ 21950021 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1915024
aactggctctcatggggACTGGAACGGAAGACCCAAGACCCATCTGCTGCATAGGATAAGTTCAtgagagttaactgcacctcagattgctgcccaaataaatacttcagagttcatgtaacagatacatctcaacatcaactgttcaaattgctgcaaagaaaccactactaaagggcaccaataagaagagactttcttgggccaagaaacacgagcaatggaaatCCTTTGGCCAGTCCAAATAggagatttttagttccaaccaccatgtctttgtgatgcagagtaggtgaatggatctCCGCGTGTCGTTCCCCTCGGGAGGCATGGACGAGGAGGCGTGAGGTGCTTTGCTGTTTGCTgttttgaatccaaaatagg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1915024 True 384 lncRNA 0.46 2 21944028 21950021

Neighbor


gene id symbol gene type direction distance location
LOC118942478 NA coding upstream 2181 21941720 ~ 21941847 (+)
gspt1 gspt1 coding upstream 7563 21924825 ~ 21936465 (+)
dmc1 LOC106609504 coding upstream 24419 21907617 ~ 21919609 (+)
tomm22 LOC106589546 coding upstream 36807 21902605 ~ 21907221 (+)
tmem184ba LOC106609488 coding upstream 49471 21876875 ~ 21894557 (+)
LOC118942480 NA coding downstream 2987 21953008 ~ 21953135 (+)
LOC110499590 tnfrsf17 coding downstream 22717 21972738 ~ 21974195 (+)
snx29 snx29 coding downstream 24317 21974338 ~ 22091580 (+)
cpped1 cpped1 coding downstream 302110 22252131 ~ 22318724 (+)
LOC118942051 NA coding downstream 310726 22260747 ~ 22281843 (+)
G1673778 NA non-coding upstream 41948 21901867 ~ 21902080 (+)
G1673775 LOC106589545 non-coding upstream 43846 21896765 ~ 21900182 (+)
G1673768 NA non-coding upstream 77933 21865886 ~ 21866095 (+)
G1673766 NA non-coding upstream 79346 21864483 ~ 21864682 (+)
G1673765 NA non-coding upstream 80212 21863587 ~ 21863816 (+)
G1673803 NA non-coding downstream 15913 21965934 ~ 21966202 (+)
G1673783 NA non-coding downstream 18616 21968637 ~ 21971293 (+)
G1673838 NA non-coding downstream 92422 22042443 ~ 22044388 (+)
G1673841 NA non-coding downstream 98733 22048754 ~ 22050773 (+)
tnrc6b LOC106589538 other upstream 98162 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 493682 21444883 ~ 21450346 (+)
LOC110499100 LOC106589528 other upstream 506647 21422168 ~ 21437402 (+)
G1673204 NA other upstream 554250 21386329 ~ 21389778 (+)
G1673063 NA other upstream 626616 21316798 ~ 21317412 (+)
LOC110499192 LOC106589579 other downstream 1306783 23252800 ~ 23269058 (+)
faap100 faap100 other downstream 1630009 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 3132643 25082664 ~ 25083277 (+)
G1677738 NA other downstream 3686670 25636691 ~ 25641614 (+)
G1678963 NA other downstream 4512173 26462194 ~ 26467953 (+)

Expression



Co-expression Network