Gene
RNA
| Item | Value |
|---|---|
| gene id | G1673803 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 21965934 ~ 21966202 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1915030 | True | 269 | lncRNA | 0.40 | 1 | 21965934 | 21966202 |
21,964,800
21,965,200
21,965,600
21,966,000
21,966,400
21,966,800
21,967,200
21,967,600
21,968,000
21,968,400
21,968,800
21,969,200
NC_048584.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513322 | rsl1d1 | coding | upstream | 6408 | 21936590 ~ 21959627 (+) |
| LOC118942480 | NA | coding | upstream | 12799 | 21953008 ~ 21953135 (+) |
| LOC118942479 | NA | coding | upstream | 18409 | 21947398 ~ 21947525 (+) |
| LOC118942478 | NA | coding | upstream | 24087 | 21941720 ~ 21941847 (+) |
| gspt1 | gspt1 | coding | upstream | 29469 | 21924825 ~ 21936465 (+) |
| LOC110499590 | tnfrsf17 | coding | downstream | 6536 | 21972738 ~ 21974195 (+) |
| snx29 | snx29 | coding | downstream | 8136 | 21974338 ~ 22091580 (+) |
| cpped1 | cpped1 | coding | downstream | 285929 | 22252131 ~ 22318724 (+) |
| LOC118942051 | NA | coding | downstream | 294545 | 22260747 ~ 22281843 (+) |
| ercc4 | ercc4 | coding | downstream | 374527 | 22340729 ~ 22347757 (+) |
| G1673798 | NA | non-coding | upstream | 10773 | 21949247 ~ 21955161 (+) |
| G1673797 | NA | non-coding | upstream | 15913 | 21944028 ~ 21950021 (+) |
| G1673778 | NA | non-coding | upstream | 63854 | 21901867 ~ 21902080 (+) |
| G1673775 | LOC106589545 | non-coding | upstream | 65752 | 21896765 ~ 21900182 (+) |
| G1673768 | NA | non-coding | upstream | 99839 | 21865886 ~ 21866095 (+) |
| G1673783 | NA | non-coding | downstream | 2435 | 21968637 ~ 21971293 (+) |
| G1673838 | NA | non-coding | downstream | 76241 | 22042443 ~ 22044388 (+) |
| G1673841 | NA | non-coding | downstream | 82552 | 22048754 ~ 22050773 (+) |
| G1674064 | NA | non-coding | downstream | 228777 | 22194979 ~ 22195354 (+) |
| tnrc6b | LOC106589538 | other | upstream | 120068 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 515588 | 21444883 ~ 21450346 (+) |
| LOC110499100 | LOC106589528 | other | upstream | 528553 | 21422168 ~ 21437402 (+) |
| G1673204 | NA | other | upstream | 576156 | 21386329 ~ 21389778 (+) |
| LOC110499192 | LOC106589579 | other | downstream | 1290602 | 23252800 ~ 23269058 (+) |
| faap100 | faap100 | other | downstream | 1613828 | 23576429 ~ 23582556 (+) |
| G1677419 | LOC100194703 | other | downstream | 3116462 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 3670489 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 4495992 | 26462194 ~ 26467953 (+) |
