Gene
RNA
| Item | Value |
|---|---|
| gene id | G1673838 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 22042443 ~ 22044388 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1915069 | True | 310 | lncRNA | 0.57 | 4 | 22042443 | 22044388 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499590 | tnfrsf17 | coding | upstream | 68248 | 21972738 ~ 21974195 (+) |
| LOC110513322 | rsl1d1 | coding | upstream | 82917 | 21936590 ~ 21959627 (+) |
| LOC118942480 | NA | coding | upstream | 89308 | 21953008 ~ 21953135 (+) |
| LOC118942479 | NA | coding | upstream | 94918 | 21947398 ~ 21947525 (+) |
| LOC118942478 | NA | coding | upstream | 100596 | 21941720 ~ 21941847 (+) |
| cpped1 | cpped1 | coding | downstream | 207743 | 22252131 ~ 22318724 (+) |
| LOC118942051 | NA | coding | downstream | 216359 | 22260747 ~ 22281843 (+) |
| ercc4 | ercc4 | coding | downstream | 296341 | 22340729 ~ 22347757 (+) |
| mrtfba | mkl2 | coding | downstream | 303529 | 22347917 ~ 22388445 (+) |
| foxj1b | LOC106589554 | coding | downstream | 416852 | 22461240 ~ 22465079 (+) |
| G1673783 | NA | non-coding | upstream | 71150 | 21968637 ~ 21971293 (+) |
| G1673803 | NA | non-coding | upstream | 76241 | 21965934 ~ 21966202 (+) |
| G1673798 | NA | non-coding | upstream | 87282 | 21949247 ~ 21955161 (+) |
| G1673797 | NA | non-coding | upstream | 92422 | 21944028 ~ 21950021 (+) |
| G1673841 | NA | non-coding | downstream | 4366 | 22048754 ~ 22050773 (+) |
| G1674064 | NA | non-coding | downstream | 150591 | 22194979 ~ 22195354 (+) |
| G1674065 | NA | non-coding | downstream | 151809 | 22196197 ~ 22196404 (+) |
| G1674044 | NA | non-coding | downstream | 155730 | 22200118 ~ 22206985 (+) |
| G1674190 | NA | non-coding | downstream | 208945 | 22253333 ~ 22253731 (+) |
| tnrc6b | LOC106589538 | other | upstream | 196577 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 592097 | 21444883 ~ 21450346 (+) |
| LOC110499100 | LOC106589528 | other | upstream | 605062 | 21422168 ~ 21437402 (+) |
| G1673204 | NA | other | upstream | 652665 | 21386329 ~ 21389778 (+) |
| LOC110499192 | LOC106589579 | other | downstream | 1212416 | 23252800 ~ 23269058 (+) |
| faap100 | faap100 | other | downstream | 1535642 | 23576429 ~ 23582556 (+) |
| G1677419 | LOC100194703 | other | downstream | 3038276 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 3592303 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 4417806 | 26462194 ~ 26467953 (+) |
