G1674064


Basic Information

Item Value
gene id G1674064
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22194979 ~ 22195354 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1915333
TAAGAAGGGAATAAATGCAGAGGCCTTTGGCATCTCAGTTGGGAAAATAGGTGTTGAAAATAACATGCAGAAAACTAGTGATAATAGTTTTCAATGGATTTAAGGCTTTAAAGAGCATTTCCTGAATAATTTCATATCAACATGAAACATCAAATGAATCACTGAATCGCTGGTGTtgaaaaatacactgctcaaaaaaataagggaacacttaaacaacacaatgtaactccaagtcaatcacacttctgtaaaatcaaactgtccacttaggaagcaacactgattgacaataaatgttacatgctgttgtgcaaatggaatagacaacaggttgaaattataggcaattagcaagacacccccaataaaggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1915333 True 376 lncRNA 0.35 1 22194979 22195354

Neighbor

gene id symbol gene type direction distance location
snx29 snx29 coding upstream 103399 21974338 ~ 22091580 (+)
LOC110499590 tnfrsf17 coding upstream 220784 21972738 ~ 21974195 (+)
LOC110513322 rsl1d1 coding upstream 235453 21936590 ~ 21959627 (+)
cpped1 cpped1 coding downstream 56777 22252131 ~ 22318724 (+)
LOC118942051 NA coding downstream 65393 22260747 ~ 22281843 (+)
ercc4 ercc4 coding downstream 145375 22340729 ~ 22347757 (+)
mrtfba mkl2 coding downstream 152563 22347917 ~ 22388445 (+)
foxj1b LOC106589554 coding downstream 265886 22461240 ~ 22465079 (+)
G1673841 NA non-coding upstream 144206 22048754 ~ 22050773 (+)
G1673838 NA non-coding upstream 150591 22042443 ~ 22044388 (+)
G1673783 NA non-coding upstream 223686 21968637 ~ 21971293 (+)
G1673803 NA non-coding upstream 228777 21965934 ~ 21966202 (+)
G1674065 NA non-coding downstream 843 22196197 ~ 22196404 (+)
G1674044 NA non-coding downstream 4764 22200118 ~ 22206985 (+)
G1674190 NA non-coding downstream 57979 22253333 ~ 22253731 (+)
G1674254 NA non-coding downstream 104835 22300189 ~ 22300408 (+)
G1674259 NA non-coding downstream 108666 22304020 ~ 22304231 (+)
tnrc6b LOC106589538 other upstream 349113 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 744633 21444883 ~ 21450346 (+)
LOC110499100 LOC106589528 other upstream 757598 21422168 ~ 21437402 (+)
G1673204 NA other upstream 805201 21386329 ~ 21389778 (+)
LOC110499192 LOC106589579 other downstream 1061450 23252800 ~ 23269058 (+)
faap100 faap100 other downstream 1384676 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 2887310 25082664 ~ 25083277 (+)
G1677738 NA other downstream 3441337 25636691 ~ 25641614 (+)
G1678963 NA other downstream 4266840 26462194 ~ 26467953 (+)

Expression


Co-expression Network