G1674254


Basic Information

Item Value
gene id G1674254
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22300189 ~ 22300408 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1915531
ggcgtggaaCCCCGACGAGCAGGCTGAGGCATGAAGTGGGATGGgagcctgatgagccggctgaggcggGGAGCCCGACGAGCTGGCTGAGGCATGACGTTTGATGGGAGCCTGCCGAGCCAACCGAGGCAAGGAAACATCTCGAGCCAGCTAAGGCGTGGAAGCCCGCTGAGGCACCCCTGGTTCCCCTGGAAGCGGGCACCCAGACCCGACATCACCA

Function

NR:

description
uncharacterized protein LOC110485786

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1915531 True 220 lncRNA 0.66 1 22300189 22300408

Neighbor

gene id symbol gene type direction distance location
LOC118942051 NA coding upstream 18346 22260747 ~ 22281843 (+)
snx29 snx29 coding upstream 208609 21974338 ~ 22091580 (+)
LOC110499590 tnfrsf17 coding upstream 325994 21972738 ~ 21974195 (+)
LOC118942480 NA coding upstream 347054 21953008 ~ 21953135 (+)
LOC118942479 NA coding upstream 352664 21947398 ~ 21947525 (+)
ercc4 ercc4 coding downstream 40321 22340729 ~ 22347757 (+)
mrtfba mkl2 coding downstream 47509 22347917 ~ 22388445 (+)
foxj1b LOC106589554 coding downstream 160832 22461240 ~ 22465079 (+)
zgc:163057 hbad coding downstream 261041 22561449 ~ 22562880 (+)
LOC110499167 LOC106589556 coding downstream 271319 22571727 ~ 22572592 (+)
G1674190 NA non-coding upstream 46458 22253333 ~ 22253731 (+)
G1674044 NA non-coding upstream 93204 22200118 ~ 22206985 (+)
G1674065 NA non-coding upstream 103785 22196197 ~ 22196404 (+)
G1674064 NA non-coding upstream 104835 22194979 ~ 22195354 (+)
G1673841 NA non-coding upstream 249416 22048754 ~ 22050773 (+)
G1674259 NA non-coding downstream 3612 22304020 ~ 22304231 (+)
G1674261 NA non-coding downstream 4819 22305227 ~ 22305489 (+)
G1674263 NA non-coding downstream 5311 22305719 ~ 22305964 (+)
G1674292 NA non-coding downstream 26957 22327365 ~ 22327568 (+)
G1674319 NA non-coding downstream 88058 22388466 ~ 22391636 (+)
LOC110513322 rsl1d1 other upstream 340562 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 454323 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 849843 21444883 ~ 21450346 (+)
LOC110499100 LOC106589528 other upstream 862808 21422168 ~ 21437402 (+)
G1673204 NA other upstream 910411 21386329 ~ 21389778 (+)
LOC110499192 LOC106589579 other downstream 956396 23252800 ~ 23269058 (+)
faap100 faap100 other downstream 1279622 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 2782256 25082664 ~ 25083277 (+)
G1677738 NA other downstream 3336283 25636691 ~ 25641614 (+)
G1678963 NA other downstream 4161786 26462194 ~ 26467953 (+)

Expression


Co-expression Network