G1674261


Basic Information

Item Value
gene id G1674261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22305227 ~ 22305489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1915538
aacaggaactaaaacagacaggagcaagggaaaaccgctggtaggtttcacgaaacaaaacgaactggcaacagacaaacagagaacacaggtataaatacactggggataatggggaagattggCGACACCTGGAGACAAGCACGAAGACTGGtgcaacagatcagggtgtgacatactGTCCAGTATAACACATACATAGTGTCCAgtataacacatactgtatgtacatgtaggtagagttaaagtgactatgtatgcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1915538 True 263 lncRNA 0.43 1 22305227 22305489

Neighbor

gene id symbol gene type direction distance location
LOC118942051 NA coding upstream 23384 22260747 ~ 22281843 (+)
snx29 snx29 coding upstream 213647 21974338 ~ 22091580 (+)
LOC110499590 tnfrsf17 coding upstream 331032 21972738 ~ 21974195 (+)
LOC118942480 NA coding upstream 352092 21953008 ~ 21953135 (+)
LOC118942479 NA coding upstream 357702 21947398 ~ 21947525 (+)
ercc4 ercc4 coding downstream 35240 22340729 ~ 22347757 (+)
mrtfba mkl2 coding downstream 42428 22347917 ~ 22388445 (+)
foxj1b LOC106589554 coding downstream 155751 22461240 ~ 22465079 (+)
zgc:163057 hbad coding downstream 255960 22561449 ~ 22562880 (+)
LOC110499167 LOC106589556 coding downstream 266238 22571727 ~ 22572592 (+)
G1674259 NA non-coding upstream 996 22304020 ~ 22304231 (+)
G1674254 NA non-coding upstream 4819 22300189 ~ 22300408 (+)
G1674190 NA non-coding upstream 51496 22253333 ~ 22253731 (+)
G1674044 NA non-coding upstream 98242 22200118 ~ 22206985 (+)
G1674065 NA non-coding upstream 108823 22196197 ~ 22196404 (+)
G1674263 NA non-coding downstream 230 22305719 ~ 22305964 (+)
G1674292 NA non-coding downstream 21876 22327365 ~ 22327568 (+)
G1674319 NA non-coding downstream 82977 22388466 ~ 22391636 (+)
G1674331 NA non-coding downstream 91531 22397020 ~ 22397239 (+)
G1674333 NA non-coding downstream 94839 22400328 ~ 22400573 (+)
LOC110513322 rsl1d1 other upstream 345600 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 459361 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 854881 21444883 ~ 21450346 (+)
LOC110499100 LOC106589528 other upstream 867846 21422168 ~ 21437402 (+)
G1673204 NA other upstream 915449 21386329 ~ 21389778 (+)
LOC110499192 LOC106589579 other downstream 951315 23252800 ~ 23269058 (+)
faap100 faap100 other downstream 1274541 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 2777175 25082664 ~ 25083277 (+)
G1677738 NA other downstream 3331202 25636691 ~ 25641614 (+)
G1678963 NA other downstream 4156705 26462194 ~ 26467953 (+)

Expression


Co-expression Network