Gene
RNA
| Item | Value |
|---|---|
| gene id | G1674343 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 22409989 ~ 22410212 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1915634 | True | 224 | lncRNA | 0.44 | 1 | 22409989 | 22410212 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mrtfba | mkl2 | coding | upstream | 21544 | 22347917 ~ 22388445 (+) |
| ercc4 | ercc4 | coding | upstream | 62232 | 22340729 ~ 22347757 (+) |
| cpped1 | cpped1 | coding | upstream | 91265 | 22252131 ~ 22318724 (+) |
| LOC118942051 | NA | coding | upstream | 128146 | 22260747 ~ 22281843 (+) |
| snx29 | snx29 | coding | upstream | 318409 | 21974338 ~ 22091580 (+) |
| foxj1b | LOC106589554 | coding | downstream | 51028 | 22461240 ~ 22465079 (+) |
| zgc:163057 | hbad | coding | downstream | 151237 | 22561449 ~ 22562880 (+) |
| LOC110499167 | LOC106589556 | coding | downstream | 161515 | 22571727 ~ 22572592 (+) |
| LOC110499592 | LOC106589557 | coding | downstream | 164330 | 22574542 ~ 22575413 (+) |
| LOC118942010 | LOC106589557 | coding | downstream | 172604 | 22582816 ~ 22583667 (+) |
| G1674339 | NA | non-coding | upstream | 3705 | 22405940 ~ 22406284 (+) |
| G1674333 | NA | non-coding | upstream | 9416 | 22400328 ~ 22400573 (+) |
| G1674331 | NA | non-coding | upstream | 12750 | 22397020 ~ 22397239 (+) |
| G1674319 | NA | non-coding | upstream | 18353 | 22388466 ~ 22391636 (+) |
| G1674292 | NA | non-coding | upstream | 82421 | 22327365 ~ 22327568 (+) |
| G1674321 | LOC106589553 | non-coding | downstream | 4702 | 22414914 ~ 22418894 (+) |
| G1674386 | NA | non-coding | downstream | 67423 | 22477635 ~ 22477851 (+) |
| G1674387 | NA | non-coding | downstream | 67790 | 22478002 ~ 22478209 (+) |
| G1674390 | NA | non-coding | downstream | 71200 | 22481412 ~ 22481707 (+) |
| LOC110513322 | rsl1d1 | other | upstream | 450362 | 21936590 ~ 21959627 (+) |
| tnrc6b | LOC106589538 | other | upstream | 564123 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 959643 | 21444883 ~ 21450346 (+) |
| LOC110499100 | LOC106589528 | other | upstream | 972608 | 21422168 ~ 21437402 (+) |
| G1673204 | NA | other | upstream | 1020211 | 21386329 ~ 21389778 (+) |
| LOC110499192 | LOC106589579 | other | downstream | 846592 | 23252800 ~ 23269058 (+) |
| faap100 | faap100 | other | downstream | 1169818 | 23576429 ~ 23582556 (+) |
| G1677419 | LOC100194703 | other | downstream | 2672452 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 3226479 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 4051982 | 26462194 ~ 26467953 (+) |
