G1674387


Basic Information

Item Value
gene id G1674387
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22478002 ~ 22478209 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1915680
ttctaagtgacgccAAACATTTGAACGGCAGTGTATGTCAGATACTTTCAAATATGCATGATGAAGGTAACTGAGGTGCTATTGGAGTTTGCTATTTTtgaactattccattggttccattgcactGGGCAGAACTAACCAAGCACAGCTCAAGTATCTGAAAGTATTTTTACGTTATGCATTTCACCCAGGTTTGGTAGATATATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1915680 True 208 lncRNA 0.38 1 22478002 22478209

Neighbor

gene id symbol gene type direction distance location
foxj1b LOC106589554 coding upstream 12923 22461240 ~ 22465079 (+)
mrtfba mkl2 coding upstream 89557 22347917 ~ 22388445 (+)
ercc4 ercc4 coding upstream 130245 22340729 ~ 22347757 (+)
cpped1 cpped1 coding upstream 159278 22252131 ~ 22318724 (+)
zgc:163057 hbad coding downstream 83240 22561449 ~ 22562880 (+)
LOC110499167 LOC106589556 coding downstream 93518 22571727 ~ 22572592 (+)
LOC110499592 LOC106589557 coding downstream 96333 22574542 ~ 22575413 (+)
LOC118942010 LOC106589557 coding downstream 104607 22582816 ~ 22583667 (+)
LOC110499593 LOC106589557 coding downstream 112894 22591103 ~ 22591954 (+)
G1674386 NA non-coding upstream 151 22477635 ~ 22477851 (+)
G1674321 LOC106589553 non-coding upstream 59108 22414914 ~ 22418894 (+)
G1674343 NA non-coding upstream 67790 22409989 ~ 22410212 (+)
G1674339 NA non-coding upstream 71718 22405940 ~ 22406284 (+)
G1674390 NA non-coding downstream 3203 22481412 ~ 22481707 (+)
G1674393 NA non-coding downstream 6849 22485058 ~ 22485285 (+)
G1674398 NA non-coding downstream 12589 22490798 ~ 22492131 (+)
G1674404 rhbl4 non-coding downstream 18256 22496465 ~ 22496791 (+)
G1674409 NA non-coding downstream 25914 22504123 ~ 22505126 (+)
LOC110513322 rsl1d1 other upstream 518375 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 632136 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 1027656 21444883 ~ 21450346 (+)
LOC110499100 LOC106589528 other upstream 1040621 21422168 ~ 21437402 (+)
G1673204 NA other upstream 1088224 21386329 ~ 21389778 (+)
LOC110499192 LOC106589579 other downstream 778595 23252800 ~ 23269058 (+)
faap100 faap100 other downstream 1101821 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 2604455 25082664 ~ 25083277 (+)
G1677738 NA other downstream 3158482 25636691 ~ 25641614 (+)
G1678963 NA other downstream 3983985 26462194 ~ 26467953 (+)

Expression


Co-expression Network