G1674404 (rhbl4)


Basic Information

Item Value
gene id G1674404
gene name rhbl4
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22496465 ~ 22496791 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1915701
CTCCCTTTGGTCCCAATGCAGCATGGCCGTCCGGTGATGGCACAGTCTATGTGGGGGAGGTTAGTGTGGTTGCCTGGGTTGTACCTGGTACACACTGGCCACTTGGTGATGTCATCAGGCCACTCATGAGGCGACACAGAGGCTGGCTCCAGGCATATTCTGGGGTCCTGGTGGCAGACTGAGCCGTGCTGACGgaccttcccctccaggagaggAGCA

Function

NR:

description
Rhomboid-like protease 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1915701 True 219 lncRNA 0.60 2 22496465 22496791

Neighbor

gene id symbol gene type direction distance location
foxj1b LOC106589554 coding upstream 31386 22461240 ~ 22465079 (+)
mrtfba mkl2 coding upstream 108020 22347917 ~ 22388445 (+)
ercc4 ercc4 coding upstream 148708 22340729 ~ 22347757 (+)
cpped1 cpped1 coding upstream 177741 22252131 ~ 22318724 (+)
zgc:163057 hbad coding downstream 64658 22561449 ~ 22562880 (+)
LOC110499167 LOC106589556 coding downstream 74936 22571727 ~ 22572592 (+)
LOC110499592 LOC106589557 coding downstream 77751 22574542 ~ 22575413 (+)
LOC118942010 LOC106589557 coding downstream 86025 22582816 ~ 22583667 (+)
LOC110499593 LOC106589557 coding downstream 94312 22591103 ~ 22591954 (+)
G1674398 NA non-coding upstream 4334 22490798 ~ 22492131 (+)
G1674393 NA non-coding upstream 11180 22485058 ~ 22485285 (+)
G1674390 NA non-coding upstream 14758 22481412 ~ 22481707 (+)
G1674387 NA non-coding upstream 18256 22478002 ~ 22478209 (+)
G1674386 NA non-coding upstream 18614 22477635 ~ 22477851 (+)
G1674409 NA non-coding downstream 7332 22504123 ~ 22505126 (+)
G1674434 NA non-coding downstream 44131 22540922 ~ 22541149 (+)
G1674441 NA non-coding downstream 53710 22550501 ~ 22550771 (+)
G1674446 NA non-coding downstream 60193 22556984 ~ 22557210 (+)
G1674616 NA non-coding downstream 139866 22636657 ~ 22636891 (+)
LOC110513322 rsl1d1 other upstream 536838 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 650599 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 1046119 21444883 ~ 21450346 (+)
LOC110499100 LOC106589528 other upstream 1059084 21422168 ~ 21437402 (+)
G1673204 NA other upstream 1106687 21386329 ~ 21389778 (+)
LOC110499192 LOC106589579 other downstream 760013 23252800 ~ 23269058 (+)
faap100 faap100 other downstream 1083239 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 2585873 25082664 ~ 25083277 (+)
G1677738 NA other downstream 3139900 25636691 ~ 25641614 (+)
G1678963 NA other downstream 3965403 26462194 ~ 26467953 (+)

Expression


Co-expression Network