G1674441


Basic Information

Item Value
gene id G1674441
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22550501 ~ 22550771 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1915741
ctctctctctctctctctcactctctcactcattctctttctctctctctgtatagacACCTTaactgaggaaagagagggacagtgagATAGAacgccagacagagagagagagagagagagagagagagagagagagagagagagagagagagggagagcaaattTAACCGTGTAATAGCTTTTATAAGGCATGCAGGCCTTTCCCCTCCCTTTTAATTGTTTTGTAGCCTGTGTGAGCCCTAAACTACGTGCAGGAAATTCAGAAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1915741 True 271 lncRNA 0.46 1 22550501 22550771

Neighbor

gene id symbol gene type direction distance location
foxj1b LOC106589554 coding upstream 85422 22461240 ~ 22465079 (+)
mrtfba mkl2 coding upstream 162056 22347917 ~ 22388445 (+)
ercc4 ercc4 coding upstream 202744 22340729 ~ 22347757 (+)
cpped1 cpped1 coding upstream 231777 22252131 ~ 22318724 (+)
zgc:163057 hbad coding downstream 10678 22561449 ~ 22562880 (+)
LOC110499167 LOC106589556 coding downstream 20956 22571727 ~ 22572592 (+)
LOC110499592 LOC106589557 coding downstream 23771 22574542 ~ 22575413 (+)
LOC118942010 LOC106589557 coding downstream 32045 22582816 ~ 22583667 (+)
LOC110499593 LOC106589557 coding downstream 40332 22591103 ~ 22591954 (+)
G1674434 NA non-coding upstream 9352 22540922 ~ 22541149 (+)
G1674409 NA non-coding upstream 45375 22504123 ~ 22505126 (+)
G1674404 rhbl4 non-coding upstream 53710 22496465 ~ 22496791 (+)
G1674398 NA non-coding upstream 58370 22490798 ~ 22492131 (+)
G1674393 NA non-coding upstream 65216 22485058 ~ 22485285 (+)
G1674446 NA non-coding downstream 6213 22556984 ~ 22557210 (+)
G1674616 NA non-coding downstream 85886 22636657 ~ 22636891 (+)
G1674618 NA non-coding downstream 88783 22639554 ~ 22639924 (+)
arhgap17a arhgap17 non-coding downstream 137355 22642425 ~ 22691724 (+)
G1674659 NA non-coding downstream 148162 22698933 ~ 22699144 (+)
LOC110513322 rsl1d1 other upstream 590874 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 704635 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 1100155 21444883 ~ 21450346 (+)
LOC110499100 LOC106589528 other upstream 1113120 21422168 ~ 21437402 (+)
G1673204 NA other upstream 1160723 21386329 ~ 21389778 (+)
LOC110499192 LOC106589579 other downstream 706033 23252800 ~ 23269058 (+)
faap100 faap100 other downstream 1029259 23576429 ~ 23582556 (+)
G1677419 LOC100194703 other downstream 2531893 25082664 ~ 25083277 (+)
G1677738 NA other downstream 3085920 25636691 ~ 25641614 (+)
G1678963 NA other downstream 3911423 26462194 ~ 26467953 (+)

Expression


Co-expression Network