G1674564 (hbad)


Basic Information

Item Value
gene id G1674564
gene name hbad
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22561393 ~ 22562892 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1915884
AGGTGTTTCTGTCATGTTTTATTACAAAagaaaaacacacaaataaaataCTCTAAGTTAATGGAACAGCAACATTTGGTTTATATGATGGGGCTATGATGCTCCTTATCTGTATTTCTCTGCAAGGACGGCTGCGAAGGCCGAGAGGTACTTGTCCATGGCTGCGTGCGCGACAGGATCGAACTCATCACCCATGTGAGCGGCCAAAGTCACGAGGATACAGTGACAAAGAAGCTGTGAGGGaaataaacaaaacacaaagGGAAAAAAATCATAAAGTAAACCACAAGTGCACTTGTTAAATTTCCTTCATAGATTTGAAATGAAATTATTGGTATaagaaatatggtggaaactcccaGTCTATGCCAACACCAATTTGTGGGGAGTAGTGAATGAGTGCACAATTCAAGGAGTAAAGATTATTAGGACACAATGAGTGTGTTCCAGTAGATGATAAGTAGGGATAGGGATGTTCTAGGGCTAATATCTGATGGAAAAGTTAATCAAGAGAAATAGGGAAGGCACCTTGAAGTTGCAGGGGTCTATTCTCAGTTTGTAGGCATGCAGTGTTTGGAGCGGTGCCAGGGTGACCATCATCGAGCTGATGTCTTTGGAACACTCAGCTATCGCGAGAACTATCTTCTTCCCGTGGGAACGCAGGTGTGGGGACCGGGGTCTGATGTCCAGGTGGGCGAAGTATGTTTTCGTTCCGGGAAAAGTCGTCATCATCCTAGAAGACATTCAGCTCCGATGTCGGAAGCCACGGGAATCATTTTGTCCCAAATTTTAGCGATCAGCTCTTTTTCGTGGTCTGTGAGCATATTGTAACCCGTTGCGCTGGTGCTATGCGTAGAAGTTGAATGTCTGGACGGGCGCACGGCACAGGTCTGCGTAAAGGTGTTAGTCAACCATTTTTTTGCACCAGTATAACCCGTCAACGTGATTTGCTTGCATTTTTTCTGGCAGTATTTACAACAATTGTCTAAATTTGGTAAAATAAATGGTCATTTGCAGCGGTCGTTTGCGGTAGGCCTACTCCTGTCTTCGGGTTGTTTTCCTTCTGAATGCTGAGGAGAGATAACCACTTAAGGGTGGGCAAGTTGCGCAGAAGACCC

Function

symbol description
hbad 4-hydroxybenzoyl-CoA reductase subunit beta

NR:

description
hemoglobin subunit alpha-D

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1915884 True 1118 lncRNA 0.44 2 22561393 22562892

Neighbor

gene id symbol gene type direction distance location
rhbdf1b LOC106589555 coding downstream 23691 22490738 ~ 22537702 (-)
ubald1a LOC106589553 coding downstream 115358 22414614 ~ 22446035 (-)
LOC110499164 litaf coding downstream 166368 22391641 ~ 22395025 (-)
LOC118942052 mkl2 coding downstream 172070 22386323 ~ 22391573 (-)
shisa9a shisa9 coding downstream 308947 22204992 ~ 22252446 (-)
aqp8a.2 aqp8 coding upstream 40704 22603596 ~ 22607933 (-)
aqp8a.1 LOC106589558 coding upstream 45819 22608711 ~ 22615064 (-)
lcmt1 lcmt1 coding upstream 66635 22629527 ~ 22639689 (-)
grid2ipb LOC106589205 coding upstream 137529 22700421 ~ 22715611 (-)
LOC110499178 NA coding upstream 175997 22738889 ~ 22739927 (-)
G1674558 NA non-coding downstream 21355 22539839 ~ 22540038 (-)
G1674554 NA non-coding downstream 26896 22533350 ~ 22534497 (-)
G1674539 NA non-coding downstream 72678 22488427 ~ 22488715 (-)
G1674538 NA non-coding downstream 73341 22487641 ~ 22488052 (-)
G1674534 NA non-coding downstream 77406 22483589 ~ 22483987 (-)
G1674565 NA non-coding upstream 1403 22564295 ~ 22568906 (-)
G1674563 LOC106589556 non-coding upstream 8886 22571778 ~ 22572594 (-)
G1674762 NA non-coding upstream 118225 22681117 ~ 22683665 (-)
G1674767 NA non-coding upstream 126999 22689891 ~ 22691720 (-)
G1674768 NA non-coding upstream 132625 22695517 ~ 22697421 (-)
G1674481 LOC106613263 other downstream 164170 22396909 ~ 22397223 (-)
G1674299 NA other downstream 229587 22331350 ~ 22331806 (-)
G1673740 LOC106589538 other downstream 716600 21836333 ~ 21844793 (-)
G1674592 NA other upstream 28678 22591570 ~ 22601548 (-)
msrb1b LOC100705913 other upstream 272931 22835823 ~ 22837899 (-)
G1675801 LOC107699850 other upstream 294221 22857113 ~ 22864346 (-)
LOC118942011 NA other upstream 632073 23192192 ~ 23204089 (-)
G1676051 ccz1 other upstream 767005 23329897 ~ 23332080 (-)

Expression


Co-expression Network