Gene
RNA
| Item | Value |
|---|---|
| gene id | G1674618 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 22639554 ~ 22639924 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1915977 | True | 371 | lncRNA | 0.46 | 1 | 22639554 | 22639924 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499168 | LOC106589557 | coding | upstream | 38013 | 22600486 ~ 22601541 (+) |
| LOC110499593 | LOC106589557 | coding | upstream | 47600 | 22591103 ~ 22591954 (+) |
| LOC118942010 | LOC106589557 | coding | upstream | 55887 | 22582816 ~ 22583667 (+) |
| LOC110499592 | LOC106589557 | coding | upstream | 64141 | 22574542 ~ 22575413 (+) |
| LOC110499167 | LOC106589556 | coding | upstream | 66962 | 22571727 ~ 22572592 (+) |
| arhgap17a | arhgap17 | coding | downstream | 2501 | 22642425 ~ 22691724 (+) |
| zdhhc4 | zdhhc4 | coding | downstream | 91406 | 22731330 ~ 22738523 (+) |
| pgp | pgp | coding | downstream | 101098 | 22741022 ~ 22743986 (+) |
| bricd5 | LOC106589562 | coding | downstream | 104300 | 22744224 ~ 22748899 (+) |
| tex2l | LOC106589568 | coding | downstream | 201344 | 22841268 ~ 22865328 (+) |
| G1674616 | NA | non-coding | upstream | 2663 | 22636657 ~ 22636891 (+) |
| G1674446 | NA | non-coding | upstream | 82344 | 22556984 ~ 22557210 (+) |
| G1674441 | NA | non-coding | upstream | 88783 | 22550501 ~ 22550771 (+) |
| G1674434 | NA | non-coding | upstream | 98405 | 22540922 ~ 22541149 (+) |
| G1674409 | NA | non-coding | upstream | 134428 | 22504123 ~ 22505126 (+) |
| G1674659 | NA | non-coding | downstream | 59009 | 22698933 ~ 22699144 (+) |
| G1674664 | LOC106609649 | non-coding | downstream | 65636 | 22705560 ~ 22706269 (+) |
| G1674625 | NA | non-coding | downstream | 109161 | 22749085 ~ 22765432 (+) |
| G1674840 | NA | non-coding | downstream | 188643 | 22828567 ~ 22828796 (+) |
| LOC110513322 | rsl1d1 | other | upstream | 679927 | 21936590 ~ 21959627 (+) |
| tnrc6b | LOC106589538 | other | upstream | 793688 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 1189208 | 21444883 ~ 21450346 (+) |
| LOC110499100 | LOC106589528 | other | upstream | 1202173 | 21422168 ~ 21437402 (+) |
| G1673204 | NA | other | upstream | 1249776 | 21386329 ~ 21389778 (+) |
| LOC110499192 | LOC106589579 | other | downstream | 616880 | 23252800 ~ 23269058 (+) |
| faap100 | faap100 | other | downstream | 940106 | 23576429 ~ 23582556 (+) |
| G1677419 | LOC100194703 | other | downstream | 2442740 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 2996767 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 3822270 | 26462194 ~ 26467953 (+) |
