Gene
RNA
| Item | Value |
|---|---|
| gene id | G1674762 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 22681117 ~ 22683665 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1916131 | False | 613 | lncRNA | 0.49 | 2 | 22681117 | 22681850 |
| TU1916135 | True | 221 | lncRNA | 0.51 | 3 | 22683096 | 22683665 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lcmt1 | lcmt1 | coding | downstream | 41428 | 22629527 ~ 22639689 (-) |
| aqp8a.1 | LOC106589558 | coding | downstream | 66053 | 22608711 ~ 22615064 (-) |
| aqp8a.2 | aqp8 | coding | downstream | 73184 | 22603596 ~ 22607933 (-) |
| rhbdf1b | LOC106589555 | coding | downstream | 143415 | 22490738 ~ 22537702 (-) |
| ubald1a | LOC106589553 | coding | downstream | 235082 | 22414614 ~ 22446035 (-) |
| grid2ipb | LOC106589205 | coding | upstream | 16756 | 22700421 ~ 22715611 (-) |
| LOC110499178 | NA | coding | upstream | 55224 | 22738889 ~ 22739927 (-) |
| LOC110499175 | mlst8 | coding | upstream | 65414 | 22749079 ~ 22757699 (-) |
| LOC110499179 | LOC106589565 | coding | upstream | 106095 | 22789760 ~ 22812764 (-) |
| msrb1b | LOC100705913 | coding | upstream | 152158 | 22835823 ~ 22837899 (-) |
| G1674563 | LOC106589556 | non-coding | downstream | 108523 | 22571778 ~ 22572594 (-) |
| G1674565 | NA | non-coding | downstream | 112211 | 22564295 ~ 22568906 (-) |
| G1674564 | hbad | non-coding | downstream | 118225 | 22561393 ~ 22562892 (-) |
| G1674558 | NA | non-coding | downstream | 141079 | 22539839 ~ 22540038 (-) |
| G1674554 | NA | non-coding | downstream | 146620 | 22533350 ~ 22534497 (-) |
| G1674767 | NA | non-coding | upstream | 6226 | 22689891 ~ 22691720 (-) |
| G1674768 | NA | non-coding | upstream | 11852 | 22695517 ~ 22697421 (-) |
| G1674770 | NA | non-coding | upstream | 15207 | 22698872 ~ 22699116 (-) |
| G1674750 | NA | non-coding | upstream | 47689 | 22731354 ~ 22738522 (-) |
| G1674592 | NA | other | downstream | 79569 | 22591570 ~ 22601548 (-) |
| G1674481 | LOC106613263 | other | downstream | 283894 | 22396909 ~ 22397223 (-) |
| LOC110499164 | litaf | other | downstream | 286555 | 22391641 ~ 22395025 (-) |
| LOC118942052 | mkl2 | other | downstream | 292639 | 22386323 ~ 22391573 (-) |
| G1674299 | NA | other | downstream | 349311 | 22331350 ~ 22331806 (-) |
| G1675801 | LOC107699850 | other | upstream | 173448 | 22857113 ~ 22864346 (-) |
| LOC118942011 | NA | other | upstream | 511300 | 23192192 ~ 23204089 (-) |
| G1676051 | ccz1 | other | upstream | 646232 | 23329897 ~ 23332080 (-) |
| rpl38 | NA | other | upstream | 1723794 | 24407459 ~ 24412883 (-) |
