G1674767


Basic Information

Item Value
gene id G1674767
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 22689891 ~ 22691720 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1916140
TCACATTTTTCTTCATATACTTTATTCAGAAAGGGAGTATAACCAAGCAGTCattttaGCTCAGTCTGCATACAAAACTAGCTGAGCTCAAAACGCAGCTTTAACATTTGTAGTTTAATGGCATTTGTTCATCTTTCAGAGCCTCGAAACAAGGTACTCTTTCTGCAGAAGGATAAGGCAGCAAGTTAAAGGAAAAGATGAGATAGAGGGGAATCTCAGCAAGACTACATGGATGATGATGGTCTCTGAAAAGCAGTACAAATACTGAACATGTTTTCAGTGCAACTAAAGCATCCAGAAATGTGCCCTTTAGTTGATACCATTCAGGGTCTCTTCTCTAGGAGCACAACCCTGCACTATACTCAAGGAAAAAGCAACGTGTATAAAAATAAAAGAGAATGAAGCTTTTCTGGTCTAGTGTATCCAACACCACCTCACGACTAGGTTGTTACATTGGTTTGTGTGTAAAACCCAGCTCAGTGGGAAAGGTAGAGCAGAATGATCTTCCATATAGAAACCTGTTCCCTGGAAAGCAAGCGCTTGTGGGGTTTAGACTTGGTTCAATATCAGCTGTTGAAGTGATTCACTAGTCAGATGACAAGGTAGCTACAGTATAAGCGCTTAAAACAGTCCTTTCCTATATTCACTTATACAGGAACTGTCACTTTAATGCCCCAGCAACATAGACGTAAACACAGAAGATTAGGAAGGCACCTACAAGCCAAGAGGATAAGCATGTACACTGAAAGTATATAGACCTATCCCTGCTACGAGTTATGGAACCAGTAAGGCATGCTTCAGAAAACTGCATGATTATTAACTCAAGCTACAGGGAATGTGTTTTAGGAAATAAATACAGAGAGCAAAGGATGGGTTTCATACAAAAACAGGGattaaaaaaaaaggtataatTGTGAGATAGACTGGAAACCTGCTACACTTCAGCAACAGTTATTATTTTGGCGGGATTCTACTTTTACCCACGTTTACTGTGCTTCACATTTACAAATAGTATTTTTCATTTCTTGAACTAAGGCCATCATCAAGAACAACACACCAATATCAAAGAAGTCTGTCGGTCCACTGTTAACAACCCACTCTACTAGCAGTTCCTTAACCATCATAAAACAATTCCGTATGTTAGCTTAGAAACCCAGCCCCGGGCCCTTAAAACTCATTAAGGTGCAACATCCCATGCAAATGCATACCGTTTTCAATCCAAACCTCATCATCCCCCCAAAATCTACAAAGCTTTATCGAGGCTTCATCAGTGCTACAGTTACGATTTCCTGGTGGGGAGGGGCCAGGGGGAGGCCTGTTCTGTAGTTCCACTGGGGTGGTTGAGTTGACTGTATGGAGTTGTAGCTGTAACAGGCCTGCAGTAGAGCGAACCAAGTGGGTGGTGAAGGGAAAGTTAGTGTGTGGAGGACACCGGGAGTTGGAgttgagagagagcagcagatgtGTGGTGATCTGAGGGGAGCTTGAGGTAGAAGTTGACACTAACCACAcctggagaggagatggagaggggacagagagacaaggcCAGTCCTCTTCCTTATAGAACGGTACTCTCTGTGTCCAGGTCTGAGTCTTTGGGCTGGGGCACGGACGTCATGGAGGGGGCGGTCACTGGCTGCTGGTCCACAGCAAACTCAGGGATGAAGGCTCGAGTCAACCCTTTGAGAGACAGGGCTGGG

Function

NR:

description
rho GTPase-activating protein 17-like isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1916140 True 1703 lncRNA 0.44 3 22689891 22691720

Neighbor

gene id symbol gene type direction distance location
lcmt1 lcmt1 coding downstream 50202 22629527 ~ 22639689 (-)
aqp8a.1 LOC106589558 coding downstream 74827 22608711 ~ 22615064 (-)
aqp8a.2 aqp8 coding downstream 81958 22603596 ~ 22607933 (-)
rhbdf1b LOC106589555 coding downstream 152189 22490738 ~ 22537702 (-)
ubald1a LOC106589553 coding downstream 243856 22414614 ~ 22446035 (-)
grid2ipb LOC106589205 coding upstream 8701 22700421 ~ 22715611 (-)
LOC110499178 NA coding upstream 47169 22738889 ~ 22739927 (-)
LOC110499175 mlst8 coding upstream 57359 22749079 ~ 22757699 (-)
LOC110499179 LOC106589565 coding upstream 98040 22789760 ~ 22812764 (-)
msrb1b LOC100705913 coding upstream 144103 22835823 ~ 22837899 (-)
G1674762 NA non-coding downstream 6226 22681117 ~ 22683665 (-)
G1674563 LOC106589556 non-coding downstream 117297 22571778 ~ 22572594 (-)
G1674565 NA non-coding downstream 120985 22564295 ~ 22568906 (-)
G1674564 hbad non-coding downstream 126999 22561393 ~ 22562892 (-)
G1674558 NA non-coding downstream 149853 22539839 ~ 22540038 (-)
G1674768 NA non-coding upstream 3797 22695517 ~ 22697421 (-)
G1674770 NA non-coding upstream 7152 22698872 ~ 22699116 (-)
G1674750 NA non-coding upstream 39634 22731354 ~ 22738522 (-)
G1674788 NA non-coding upstream 60113 22751833 ~ 22752208 (-)
G1674592 NA other downstream 88343 22591570 ~ 22601548 (-)
G1674481 LOC106613263 other downstream 292668 22396909 ~ 22397223 (-)
LOC110499164 litaf other downstream 295329 22391641 ~ 22395025 (-)
LOC118942052 mkl2 other downstream 301413 22386323 ~ 22391573 (-)
G1674299 NA other downstream 358085 22331350 ~ 22331806 (-)
G1675801 LOC107699850 other upstream 165393 22857113 ~ 22864346 (-)
LOC118942011 NA other upstream 503245 23192192 ~ 23204089 (-)
G1676051 ccz1 other upstream 638177 23329897 ~ 23332080 (-)
rpl38 NA other upstream 1715739 24407459 ~ 24412883 (-)

Expression


Co-expression Network