Gene
RNA
| Item | Value |
|---|---|
| gene id | G1674881 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 22939309 ~ 22940706 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1916268 | True | 491 | lncRNA | 0.46 | 2 | 22939309 | 22940706 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499185 | LOC106589570 | coding | upstream | 394 | 22918884 ~ 22938915 (+) |
| LOC110499186 | LOC106589571 | coding | upstream | 22664 | 22914122 ~ 22916645 (+) |
| tex2l | LOC106589568 | coding | upstream | 73981 | 22841268 ~ 22865328 (+) |
| bricd5 | LOC106589562 | coding | upstream | 190410 | 22744224 ~ 22748899 (+) |
| pgp | pgp | coding | upstream | 195323 | 22741022 ~ 22743986 (+) |
| baiap2l1a | LOC106589578 | coding | downstream | 263057 | 23203763 ~ 23252161 (+) |
| LOC110499192 | LOC106589579 | coding | downstream | 312094 | 23252800 ~ 23269058 (+) |
| LOC110499196 | prvt | coding | downstream | 351325 | 23292031 ~ 23293827 (+) |
| LOC110499195 | LOC106609864 | coding | downstream | 354031 | 23294737 ~ 23297531 (+) |
| pvalb2 | pvalb2 | coding | downstream | 360987 | 23301693 ~ 23303981 (+) |
| G1674848 | NA | non-coding | upstream | 106969 | 22832119 ~ 22832340 (+) |
| G1674840 | NA | non-coding | upstream | 110513 | 22828567 ~ 22828796 (+) |
| G1674625 | NA | non-coding | upstream | 173877 | 22749085 ~ 22765432 (+) |
| G1674664 | LOC106609649 | non-coding | upstream | 233040 | 22705560 ~ 22706269 (+) |
| G1674659 | NA | non-coding | upstream | 240165 | 22698933 ~ 22699144 (+) |
| G1674902 | NA | non-coding | downstream | 9680 | 22950386 ~ 22952493 (+) |
| G1674912 | NA | non-coding | downstream | 28434 | 22969140 ~ 22969575 (+) |
| G1674940 | NA | non-coding | downstream | 60879 | 23001585 ~ 23005692 (+) |
| G1674946 | NA | non-coding | downstream | 69038 | 23009744 ~ 23010909 (+) |
| G1674951 | NA | non-coding | downstream | 75494 | 23016200 ~ 23016747 (+) |
| LOC110513322 | rsl1d1 | other | upstream | 979682 | 21936590 ~ 21959627 (+) |
| tnrc6b | LOC106589538 | other | upstream | 1093443 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 1488963 | 21444883 ~ 21450346 (+) |
| LOC110499100 | LOC106589528 | other | upstream | 1501928 | 21422168 ~ 21437402 (+) |
| G1673204 | NA | other | upstream | 1549531 | 21386329 ~ 21389778 (+) |
| faap100 | faap100 | other | downstream | 639324 | 23576429 ~ 23582556 (+) |
| G1677419 | LOC100194703 | other | downstream | 2141958 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 2695985 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 3521488 | 26462194 ~ 26467953 (+) |
