Gene
RNA
| Item | Value |
|---|---|
| gene id | G1675189 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 23418135 ~ 23418386 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1916608 | True | 252 | lncRNA | 0.38 | 1 | 23418135 | 23418386 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936387 | LOC106589587 | coding | upstream | 22424 | 23369126 ~ 23395711 (+) |
| eif2ak1 | NA | coding | upstream | 41839 | 23367993 ~ 23376296 (+) |
| dlgap5 | dlgap5 | coding | upstream | 67578 | 23333421 ~ 23350557 (+) |
| ccz1 | ccz1 | coding | upstream | 86024 | 23316868 ~ 23332111 (+) |
| pvalb9 | LOC106589582 | coding | upstream | 104146 | 23308948 ~ 23313989 (+) |
| rac1 | rac1 | coding | downstream | 75210 | 23493596 ~ 23502655 (+) |
| LOC110499211 | LOC106589600 | coding | downstream | 91246 | 23509632 ~ 23518623 (+) |
| LOC110499219 | cssa28h16orf52 | coding | downstream | 116530 | 23534916 ~ 23544723 (+) |
| faap100 | faap100 | coding | downstream | 158043 | 23576429 ~ 23582556 (+) |
| LOC110499205 | slc38a10 | coding | downstream | 350384 | 23768770 ~ 23800554 (+) |
| LOC110499192 | LOC106589579 | non-coding | upstream | 159638 | 23252800 ~ 23269058 (+) |
| G1675016 | NA | non-coding | upstream | 300699 | 23115161 ~ 23117436 (+) |
| G1674951 | NA | non-coding | upstream | 401388 | 23016200 ~ 23016747 (+) |
| G1674946 | NA | non-coding | upstream | 407226 | 23009744 ~ 23010909 (+) |
| G1674940 | NA | non-coding | upstream | 412443 | 23001585 ~ 23005692 (+) |
| G1675191 | NA | non-coding | downstream | 3000 | 23421386 ~ 23421612 (+) |
| G1675195 | cyth3 | non-coding | downstream | 18959 | 23437345 ~ 23443412 (+) |
| G1675209 | NA | non-coding | downstream | 40946 | 23459332 ~ 23465663 (+) |
| G1675345 | NA | non-coding | downstream | 265072 | 23683458 ~ 23683683 (+) |
| LOC110513322 | rsl1d1 | other | upstream | 1458508 | 21936590 ~ 21959627 (+) |
| tnrc6b | LOC106589538 | other | upstream | 1572269 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 1967789 | 21444883 ~ 21450346 (+) |
| LOC110499100 | LOC106589528 | other | upstream | 1980754 | 21422168 ~ 21437402 (+) |
| G1677419 | LOC100194703 | other | downstream | 1664278 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 2218305 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 3043808 | 26462194 ~ 26467953 (+) |
| LOC110499256 | LOC106589642 | other | downstream | 3213749 | 26632095 ~ 26639269 (+) |
