Gene
RNA
| Item | Value |
|---|---|
| gene id | G1675435 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 23855326 ~ 23855754 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1916912 | True | 429 | lncRNA | 0.43 | 1 | 23855326 | 23855754 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499213 | LOC106589601 | coding | upstream | 1442 | 23846856 ~ 23853884 (+) |
| LOC110499205 | slc38a10 | coding | upstream | 54772 | 23768770 ~ 23800554 (+) |
| faap100 | faap100 | coding | upstream | 272770 | 23576429 ~ 23582556 (+) |
| LOC110499219 | cssa28h16orf52 | coding | upstream | 310603 | 23534916 ~ 23544723 (+) |
| LOC110499211 | LOC106589600 | coding | upstream | 336703 | 23509632 ~ 23518623 (+) |
| LOC118942054 | NA | coding | downstream | 4228 | 23859982 ~ 23864171 (+) |
| LOC110499210 | arsg | coding | downstream | 14736 | 23870490 ~ 23887420 (+) |
| prkar1ab | prkar1a | coding | downstream | 38883 | 23894637 ~ 23905815 (+) |
| lrrc45 | lrrc45 | coding | downstream | 90906 | 23946660 ~ 23964458 (+) |
| LOC110499218 | rac3 | coding | downstream | 116738 | 23972492 ~ 23977455 (+) |
| G1675426 | NA | non-coding | upstream | 9912 | 23845049 ~ 23845414 (+) |
| G1675420 | NA | non-coding | upstream | 17880 | 23837200 ~ 23837446 (+) |
| G1675389 | NA | non-coding | upstream | 93383 | 23761740 ~ 23761943 (+) |
| G1675384 | NA | non-coding | upstream | 104373 | 23748008 ~ 23750953 (+) |
| G1675385 | NA | non-coding | upstream | 109554 | 23744689 ~ 23745772 (+) |
| G1675436 | NA | non-coding | downstream | 82 | 23855836 ~ 23856169 (+) |
| G1675450 | NA | non-coding | downstream | 17112 | 23872866 ~ 23909060 (+) |
| G1675465 | NA | non-coding | downstream | 72736 | 23928490 ~ 23928706 (+) |
| G1675469 | NA | non-coding | downstream | 78665 | 23934419 ~ 23934836 (+) |
| G1675471 | NA | non-coding | downstream | 80591 | 23936345 ~ 23936559 (+) |
| LOC110499192 | LOC106589579 | other | upstream | 597257 | 23252800 ~ 23269058 (+) |
| LOC110513322 | rsl1d1 | other | upstream | 1895699 | 21936590 ~ 21959627 (+) |
| tnrc6b | LOC106589538 | other | upstream | 2009460 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 2404980 | 21444883 ~ 21450346 (+) |
| G1677419 | LOC100194703 | other | downstream | 1226910 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 1780937 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 2606440 | 26462194 ~ 26467953 (+) |
| LOC110499256 | LOC106589642 | other | downstream | 2776381 | 26632095 ~ 26639269 (+) |
| LOC110499259 | LOC106589644 | other | downstream | 2798873 | 26654584 ~ 26656111 (+) |
