G1675436


Basic Information

Item Value
gene id G1675436
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 23855836 ~ 23856169 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1916913
gatggtcattatggccaaacagttctatttttgtttcatcagaccagaggacatttctccagaaagtacgatctttgtccccatgtgcagttgcaaaccgtagtctggcttttttatggtgattttggagcggtggcttcttccttgctgagcggcctttcaggttatgtcgatataggactcgttttactgtggatttagatacttctgtacctgttccctccagcatcttcacaaggtcctttgctgttgtctgggattgatttgcacttttcgcaccaaagcacgttcatctctaggagacagaacgcatctccttcctgagcggtaagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1916913 True 334 lncRNA 0.46 1 23855836 23856169

Neighbor

gene id symbol gene type direction distance location
LOC110499213 LOC106589601 coding upstream 1952 23846856 ~ 23853884 (+)
LOC110499205 slc38a10 coding upstream 55282 23768770 ~ 23800554 (+)
faap100 faap100 coding upstream 273280 23576429 ~ 23582556 (+)
LOC110499219 cssa28h16orf52 coding upstream 311113 23534916 ~ 23544723 (+)
LOC110499211 LOC106589600 coding upstream 337213 23509632 ~ 23518623 (+)
LOC118942054 NA coding downstream 3813 23859982 ~ 23864171 (+)
LOC110499210 arsg coding downstream 14321 23870490 ~ 23887420 (+)
prkar1ab prkar1a coding downstream 38468 23894637 ~ 23905815 (+)
lrrc45 lrrc45 coding downstream 90491 23946660 ~ 23964458 (+)
LOC110499218 rac3 coding downstream 116323 23972492 ~ 23977455 (+)
G1675435 NA non-coding upstream 82 23855326 ~ 23855754 (+)
G1675426 NA non-coding upstream 10422 23845049 ~ 23845414 (+)
G1675420 NA non-coding upstream 18390 23837200 ~ 23837446 (+)
G1675389 NA non-coding upstream 93893 23761740 ~ 23761943 (+)
G1675384 NA non-coding upstream 104883 23748008 ~ 23750953 (+)
G1675450 NA non-coding downstream 16697 23872866 ~ 23909060 (+)
G1675465 NA non-coding downstream 72321 23928490 ~ 23928706 (+)
G1675469 NA non-coding downstream 78250 23934419 ~ 23934836 (+)
G1675471 NA non-coding downstream 80176 23936345 ~ 23936559 (+)
G1675442 NA non-coding downstream 108315 23964484 ~ 23967320 (+)
LOC110499192 LOC106589579 other upstream 597767 23252800 ~ 23269058 (+)
LOC110513322 rsl1d1 other upstream 1896209 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 2009970 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 2405490 21444883 ~ 21450346 (+)
G1677419 LOC100194703 other downstream 1226495 25082664 ~ 25083277 (+)
G1677738 NA other downstream 1780522 25636691 ~ 25641614 (+)
G1678963 NA other downstream 2606025 26462194 ~ 26467953 (+)
LOC110499256 LOC106589642 other downstream 2775966 26632095 ~ 26639269 (+)
LOC110499259 LOC106589644 other downstream 2798458 26654584 ~ 26656111 (+)

Expression


Co-expression Network