G1675469


Basic Information

Item Value
gene id G1675469
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 23934419 ~ 23934836 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1916947
agacggtgcactgtccttttctcagcacatatcaaaactgcaggctaaagttaaatctagacttggtttcctctatcgtaatcactcctctttcaccccagctgccaaactaaccctgattcagatgaccatcctacccatgtaagattacagagacataatttatagatcggtagGTAATTGTCCTCTCGAGCTGCTAGATGTttttttaccattcggccatcagatttgccaccaatgctccttatagaaCACTCTatgctcctctgtaaactggtcatctctgtatacccgtcgcaagacccactggttgatgcttatttataaaaccctcttaggcctcactccctcctatctgagatatctactgcagccctcatcctccacatacaacacccgttctgccagtcacattctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1916947 True 418 lncRNA 0.44 1 23934419 23934836

Neighbor

gene id symbol gene type direction distance location
prkar1ab prkar1a coding upstream 28604 23894637 ~ 23905815 (+)
LOC110499210 arsg coding upstream 46999 23870490 ~ 23887420 (+)
LOC118942054 NA coding upstream 70248 23859982 ~ 23864171 (+)
LOC110499213 LOC106589601 coding upstream 80535 23846856 ~ 23853884 (+)
LOC110499205 slc38a10 coding upstream 133865 23768770 ~ 23800554 (+)
lrrc45 lrrc45 coding downstream 11824 23946660 ~ 23964458 (+)
LOC110499218 rac3 coding downstream 37656 23972492 ~ 23977455 (+)
LOC110499226 gps1 coding downstream 85851 24020687 ~ 24090566 (+)
slc16a3 LOC106610249 coding downstream 211229 24146065 ~ 24169492 (+)
LOC118942055 NA coding downstream 248723 24183559 ~ 24189459 (+)
G1675465 NA non-coding upstream 5713 23928490 ~ 23928706 (+)
G1675450 NA non-coding upstream 25359 23872866 ~ 23909060 (+)
G1675436 NA non-coding upstream 78250 23855836 ~ 23856169 (+)
G1675435 NA non-coding upstream 78665 23855326 ~ 23855754 (+)
G1675426 NA non-coding upstream 89005 23845049 ~ 23845414 (+)
G1675471 NA non-coding downstream 1509 23936345 ~ 23936559 (+)
G1675442 NA non-coding downstream 29648 23964484 ~ 23967320 (+)
G1675487 NA non-coding downstream 34512 23969348 ~ 23969871 (+)
G1675488 NA non-coding downstream 43472 23978308 ~ 23978530 (+)
G1675489 NA non-coding downstream 44575 23979411 ~ 23979626 (+)
faap100 faap100 other upstream 352987 23576429 ~ 23582556 (+)
LOC110499192 LOC106589579 other upstream 676350 23252800 ~ 23269058 (+)
LOC110513322 rsl1d1 other upstream 1974792 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 2088553 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 2484073 21444883 ~ 21450346 (+)
G1677419 LOC100194703 other downstream 1147828 25082664 ~ 25083277 (+)
G1677738 NA other downstream 1701855 25636691 ~ 25641614 (+)
G1678963 NA other downstream 2527358 26462194 ~ 26467953 (+)
LOC110499256 LOC106589642 other downstream 2697299 26632095 ~ 26639269 (+)
LOC110499259 LOC106589644 other downstream 2719791 26654584 ~ 26656111 (+)

Expression


Co-expression Network