G1675471


Basic Information

Item Value
gene id G1675471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 23936345 ~ 23936559 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1916949
cgcgttggagttccggaccttggcagcaggatctgggtggaacgacagggctctTATCGACcactaccggtgtagtctccgggaggacgaccgcagggagctagcgtgtcgggacaccgctctttccctggatgagctgattgacatgtccatccgactggacaatctgctggctgcccgcgggcgttcggagagggtcctgtgtgttccaccac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562530

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1916949 True 215 lncRNA 0.62 1 23936345 23936559

Neighbor

gene id symbol gene type direction distance location
prkar1ab prkar1a coding upstream 30530 23894637 ~ 23905815 (+)
LOC110499210 arsg coding upstream 48925 23870490 ~ 23887420 (+)
LOC118942054 NA coding upstream 72174 23859982 ~ 23864171 (+)
LOC110499213 LOC106589601 coding upstream 82461 23846856 ~ 23853884 (+)
LOC110499205 slc38a10 coding upstream 135791 23768770 ~ 23800554 (+)
lrrc45 lrrc45 coding downstream 10101 23946660 ~ 23964458 (+)
LOC110499218 rac3 coding downstream 35933 23972492 ~ 23977455 (+)
LOC110499226 gps1 coding downstream 84128 24020687 ~ 24090566 (+)
slc16a3 LOC106610249 coding downstream 209506 24146065 ~ 24169492 (+)
LOC118942055 NA coding downstream 247000 24183559 ~ 24189459 (+)
G1675469 NA non-coding upstream 1509 23934419 ~ 23934836 (+)
G1675465 NA non-coding upstream 7639 23928490 ~ 23928706 (+)
G1675450 NA non-coding upstream 27285 23872866 ~ 23909060 (+)
G1675436 NA non-coding upstream 80176 23855836 ~ 23856169 (+)
G1675435 NA non-coding upstream 80591 23855326 ~ 23855754 (+)
G1675442 NA non-coding downstream 27925 23964484 ~ 23967320 (+)
G1675487 NA non-coding downstream 32789 23969348 ~ 23969871 (+)
G1675488 NA non-coding downstream 41749 23978308 ~ 23978530 (+)
G1675489 NA non-coding downstream 42852 23979411 ~ 23979626 (+)
G1675490 NA non-coding downstream 43324 23979883 ~ 23980087 (+)
faap100 faap100 other upstream 354913 23576429 ~ 23582556 (+)
LOC110499192 LOC106589579 other upstream 678276 23252800 ~ 23269058 (+)
LOC110513322 rsl1d1 other upstream 1976718 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 2090479 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 2485999 21444883 ~ 21450346 (+)
G1677419 LOC100194703 other downstream 1146105 25082664 ~ 25083277 (+)
G1677738 NA other downstream 1700132 25636691 ~ 25641614 (+)
G1678963 NA other downstream 2525635 26462194 ~ 26467953 (+)
LOC110499256 LOC106589642 other downstream 2695576 26632095 ~ 26639269 (+)
LOC110499259 LOC106589644 other downstream 2718068 26654584 ~ 26656111 (+)

Expression


Co-expression Network