Gene
RNA
| Item | Value |
|---|---|
| gene id | G1675497 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 23997052 ~ 23999931 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1916975 | True | 222 | lncRNA | 0.41 | 2 | 23997052 | 23999931 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499218 | rac3 | coding | upstream | 19597 | 23972492 ~ 23977455 (+) |
| lrrc45 | lrrc45 | coding | upstream | 32594 | 23946660 ~ 23964458 (+) |
| prkar1ab | prkar1a | coding | upstream | 91237 | 23894637 ~ 23905815 (+) |
| LOC110499210 | arsg | coding | upstream | 109632 | 23870490 ~ 23887420 (+) |
| LOC118942054 | NA | coding | upstream | 132881 | 23859982 ~ 23864171 (+) |
| LOC110499226 | gps1 | coding | downstream | 20756 | 24020687 ~ 24090566 (+) |
| slc16a3 | LOC106610249 | coding | downstream | 146134 | 24146065 ~ 24169492 (+) |
| LOC118942055 | NA | coding | downstream | 183628 | 24183559 ~ 24189459 (+) |
| LOC110499595 | NA | coding | downstream | 629612 | 24629543 ~ 24632101 (+) |
| sdk2b | sdk2 | coding | downstream | 892999 | 24892930 ~ 25354425 (+) |
| G1675490 | NA | non-coding | upstream | 16965 | 23979883 ~ 23980087 (+) |
| G1675489 | NA | non-coding | upstream | 17426 | 23979411 ~ 23979626 (+) |
| G1675488 | NA | non-coding | upstream | 18522 | 23978308 ~ 23978530 (+) |
| G1675487 | NA | non-coding | upstream | 27181 | 23969348 ~ 23969871 (+) |
| G1675442 | NA | non-coding | upstream | 29732 | 23964484 ~ 23967320 (+) |
| G1675556 | NA | non-coding | downstream | 82419 | 24082350 ~ 24083181 (+) |
| G1675586 | csnk1d | non-coding | downstream | 179018 | 24178949 ~ 24179418 (+) |
| G1675585 | csnk1d | non-coding | downstream | 180428 | 24180359 ~ 24186488 (+) |
| G1675662 | NA | non-coding | downstream | 241436 | 24241367 ~ 24241730 (+) |
| faap100 | faap100 | other | upstream | 415620 | 23576429 ~ 23582556 (+) |
| LOC110499192 | LOC106589579 | other | upstream | 738983 | 23252800 ~ 23269058 (+) |
| LOC110513322 | rsl1d1 | other | upstream | 2037425 | 21936590 ~ 21959627 (+) |
| tnrc6b | LOC106589538 | other | upstream | 2151186 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 2546706 | 21444883 ~ 21450346 (+) |
| G1677419 | LOC100194703 | other | downstream | 1082733 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 1636760 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 2462263 | 26462194 ~ 26467953 (+) |
| LOC110499256 | LOC106589642 | other | downstream | 2632204 | 26632095 ~ 26639269 (+) |
| LOC110499259 | LOC106589644 | other | downstream | 2654696 | 26654584 ~ 26656111 (+) |
